Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ATP6V0A4Q9HBG4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP6V0A4Q9HBG4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.25■■□□□ 1.31
ATP6V0A4Q9HBG4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 TERF1P5-201ENST00000477545 1207 ntBASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP6V0A4Q9HBG4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 CNN2P6-201ENST00000439038 900 ntBASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 AC013268.1-206ENST00000638368 961 ntBASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 AC112229.1-201ENST00000639295 961 ntBASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP6V0A4Q9HBG4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 TSPY6P-201ENST00000448518 926 ntBASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 AC142086.2-201ENST00000569753 217 ntBASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
ATP6V0A4Q9HBG4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 FBXW4P1-201ENST00000426721 2239 ntBASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 RBM17P2-201ENST00000616397 1405 ntBASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP6V0A4Q9HBG4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V0A4Q9HBG4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 AC244015.2-201ENST00000616358 1861 ntBASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms