Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 AC026366.1-201ENST00000488803 879 ntBASIC21.62■■□□□ 1.05
BRD9Q9H8M2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 UNC93B5-201ENST00000530315 699 ntBASIC21.62■■□□□ 1.05
BRD9Q9H8M2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
BRD9Q9H8M2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 AC133561.1-201ENST00000568600 2415 ntBASIC21.61■■□□□ 1.05
BRD9Q9H8M2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.61■■□□□ 1.05
BRD9Q9H8M2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 AP003097.1-201ENST00000530657 1135 ntBASIC21.6■■□□□ 1.05
BRD9Q9H8M2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD9Q9H8M2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD9Q9H8M2 AC003102.1-202ENST00000563394 1796 ntBASIC21.59■■□□□ 1.05
BRD9Q9H8M2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 AC233723.2-201ENST00000623798 2106 ntBASIC21.58■■□□□ 1.05
BRD9Q9H8M2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BRD9Q9H8M2 RPS2P4-201ENST00000476944 856 ntBASIC21.58■■□□□ 1.05
BRD9Q9H8M2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.58■■□□□ 1.04
BRD9Q9H8M2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.58■■□□□ 1.04
BRD9Q9H8M2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
BRD9Q9H8M2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRD9Q9H8M2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRD9Q9H8M2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.57■■□□□ 1.04
BRD9Q9H8M2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRD9Q9H8M2 AC012676.1-201ENST00000574705 1949 ntBASIC21.57■■□□□ 1.04
BRD9Q9H8M2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms