Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SCAF11Q99590 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SCAF11Q99590 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.26■■■□□ 2.43
SCAF11Q99590 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
SCAF11Q99590 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF11Q99590 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF11Q99590 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF11Q99590 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF11Q99590 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF11Q99590 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC30.25■■■□□ 2.43
SCAF11Q99590 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF11Q99590 RN7SL471P-201ENST00000580476 299 ntBASIC30.25■■■□□ 2.43
SCAF11Q99590 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF11Q99590 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
SCAF11Q99590 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC30.25■■■□□ 2.43
SCAF11Q99590 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF11Q99590 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
SCAF11Q99590 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF11Q99590 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC30.25■■■□□ 2.43
SCAF11Q99590 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC30.25■■■□□ 2.43
SCAF11Q99590 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF11Q99590 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF11Q99590 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC30.24■■■□□ 2.43
SCAF11Q99590 BX088651.1-201ENST00000540551 451 ntBASIC30.24■■■□□ 2.43
SCAF11Q99590 SPIB-206ENST00000596074 847 ntTSL 2 BASIC30.24■■■□□ 2.43
SCAF11Q99590 FAM21FP-204ENST00000608637 956 ntBASIC30.24■■■□□ 2.43
SCAF11Q99590 REXO1L12P-201ENST00000622156 912 ntBASIC30.24■■■□□ 2.43
SCAF11Q99590 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF11Q99590 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
SCAF11Q99590 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
SCAF11Q99590 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC30.23■■■□□ 2.43
SCAF11Q99590 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC30.23■■■□□ 2.43
SCAF11Q99590 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC30.23■■■□□ 2.43
SCAF11Q99590 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.23■■■□□ 2.43
SCAF11Q99590 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC30.23■■■□□ 2.43
SCAF11Q99590 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC30.23■■■□□ 2.43
SCAF11Q99590 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF11Q99590 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF11Q99590 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF11Q99590 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
SCAF11Q99590 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
SCAF11Q99590 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
SCAF11Q99590 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
SCAF11Q99590 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF11Q99590 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF11Q99590 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF11Q99590 AC100791.3-201ENST00000617619 330 ntBASIC30.22■■■□□ 2.43
SCAF11Q99590 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF11Q99590 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF11Q99590 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.22■■■□□ 2.43
SCAF11Q99590 CASK-201ENST00000378154 2494 ntTSL 5 BASIC30.21■■■□□ 2.43
SCAF11Q99590 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF11Q99590 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF11Q99590 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF11Q99590 KRT17P3-201ENST00000420566 1262 ntBASIC30.21■■■□□ 2.43
SCAF11Q99590 AC012618.2-201ENST00000428058 849 ntBASIC30.21■■■□□ 2.43
SCAF11Q99590 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.21■■■□□ 2.43
SCAF11Q99590 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC30.21■■■□□ 2.43
SCAF11Q99590 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF11Q99590 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.21■■■□□ 2.43
SCAF11Q99590 AC061975.6-201ENST00000579045 1553 ntBASIC30.21■■■□□ 2.43
SCAF11Q99590 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC30.21■■■□□ 2.43
SCAF11Q99590 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
SCAF11Q99590 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
SCAF11Q99590 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC30.2■■■□□ 2.43
SCAF11Q99590 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SCAF11Q99590 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
SCAF11Q99590 AC127496.7-201ENST00000625110 1798 ntBASIC30.2■■■□□ 2.43
SCAF11Q99590 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.2■■■□□ 2.43
SCAF11Q99590 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SCAF11Q99590 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SCAF11Q99590 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF11Q99590 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC30.19■■■□□ 2.42
SCAF11Q99590 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC30.19■■■□□ 2.42
SCAF11Q99590 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC30.19■■■□□ 2.42
SCAF11Q99590 SLC29A4P2-201ENST00000504749 1089 ntBASIC30.19■■■□□ 2.42
SCAF11Q99590 KRT18P21-201ENST00000515767 1272 ntBASIC30.19■■■□□ 2.42
SCAF11Q99590 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF11Q99590 AC092368.3-202ENST00000574180 1591 ntBASIC30.19■■■□□ 2.42
SCAF11Q99590 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC30.19■■■□□ 2.42
SCAF11Q99590 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC30.19■■■□□ 2.42
SCAF11Q99590 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC30.19■■■□□ 2.42
SCAF11Q99590 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCAF11Q99590 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC30.19■■■□□ 2.42
SCAF11Q99590 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF11Q99590 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC30.18■■■□□ 2.42
SCAF11Q99590 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF11Q99590 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC30.18■■■□□ 2.42
SCAF11Q99590 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF11Q99590 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC30.18■■■□□ 2.42
SCAF11Q99590 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SCAF11Q99590 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
SCAF11Q99590 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms