Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLCC1Q96S66 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCC1Q96S66 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCC1Q96S66 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CLCC1Q96S66 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLCC1Q96S66 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCC1Q96S66 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 DUX4L19-201ENST00000557448 1267 ntBASIC17.48■□□□□ 0.39
CLCC1Q96S66 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 AC010542.4-201ENST00000563151 1910 ntBASIC17.48■□□□□ 0.39
CLCC1Q96S66 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCC1Q96S66 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCC1Q96S66 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCC1Q96S66 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCC1Q96S66 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
CLCC1Q96S66 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLCC1Q96S66 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCC1Q96S66 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCC1Q96S66 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 UNC93B3-201ENST00000308076 687 ntBASIC17.46■□□□□ 0.39
CLCC1Q96S66 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CLCC1Q96S66 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCC1Q96S66 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.46■□□□□ 0.39
CLCC1Q96S66 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CLCC1Q96S66 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLCC1Q96S66 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLCC1Q96S66 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 305.2 ms