Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NEK1Q96PY6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NEK1Q96PY6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NEK1Q96PY6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NEK1Q96PY6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NEK1Q96PY6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NEK1Q96PY6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.75■■□□□ 1.55
NEK1Q96PY6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.75■■□□□ 1.55
NEK1Q96PY6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.75■■□□□ 1.55
NEK1Q96PY6 KRT18P61-201ENST00000585825 1298 ntBASIC24.75■■□□□ 1.55
NEK1Q96PY6 AP001160.3-201ENST00000601484 763 ntBASIC24.75■■□□□ 1.55
NEK1Q96PY6 MIR6821-201ENST00000617625 74 ntBASIC24.75■■□□□ 1.55
NEK1Q96PY6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NEK1Q96PY6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NEK1Q96PY6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.75■■□□□ 1.55
NEK1Q96PY6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NEK1Q96PY6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
NEK1Q96PY6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
NEK1Q96PY6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NEK1Q96PY6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NEK1Q96PY6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.74■■□□□ 1.55
NEK1Q96PY6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.74■■□□□ 1.55
NEK1Q96PY6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
NEK1Q96PY6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
NEK1Q96PY6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.74■■□□□ 1.55
NEK1Q96PY6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NEK1Q96PY6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
NEK1Q96PY6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NEK1Q96PY6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NEK1Q96PY6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NEK1Q96PY6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NEK1Q96PY6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
NEK1Q96PY6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.73■■□□□ 1.55
NEK1Q96PY6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NEK1Q96PY6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
NEK1Q96PY6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.73■■□□□ 1.55
NEK1Q96PY6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.73■■□□□ 1.55
NEK1Q96PY6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.73■■□□□ 1.55
NEK1Q96PY6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.72■■□□□ 1.55
NEK1Q96PY6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 AC087623.3-201ENST00000607047 1098 ntBASIC24.72■■□□□ 1.55
NEK1Q96PY6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
NEK1Q96PY6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NEK1Q96PY6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
NEK1Q96PY6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
NEK1Q96PY6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
NEK1Q96PY6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
NEK1Q96PY6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 SLC7A5P2-201ENST00000553010 536 ntBASIC24.71■■□□□ 1.55
NEK1Q96PY6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.71■■□□□ 1.55
NEK1Q96PY6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
NEK1Q96PY6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.71■■□□□ 1.55
NEK1Q96PY6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NEK1Q96PY6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NEK1Q96PY6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NEK1Q96PY6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NEK1Q96PY6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.7■■□□□ 1.54
NEK1Q96PY6 AC034268.1-201ENST00000441047 882 ntBASIC24.7■■□□□ 1.54
NEK1Q96PY6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
NEK1Q96PY6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.7■■□□□ 1.54
NEK1Q96PY6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.7■■□□□ 1.54
NEK1Q96PY6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.7■■□□□ 1.54
NEK1Q96PY6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
NEK1Q96PY6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NEK1Q96PY6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NEK1Q96PY6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.7■■□□□ 1.54
NEK1Q96PY6 KRT16P2-201ENST00000414673 1423 ntBASIC24.69■■□□□ 1.54
NEK1Q96PY6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
NEK1Q96PY6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 PKD1P6-201ENST00000343738 4769 ntBASIC24.69■■□□□ 1.54
NEK1Q96PY6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.69■■□□□ 1.54
NEK1Q96PY6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
NEK1Q96PY6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.69■■□□□ 1.54
NEK1Q96PY6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NEK1Q96PY6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.69■■□□□ 1.54
NEK1Q96PY6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NEK1Q96PY6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms