Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 AC092028.1-203ENST00000608262 953 ntBASIC17.99■□□□□ 0.47
CMTM3Q96MX0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMTM3Q96MX0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 TSPY13P-201ENST00000338964 914 ntBASIC17.98■□□□□ 0.47
CMTM3Q96MX0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 AL512408.1-201ENST00000569378 2000 ntBASIC17.98■□□□□ 0.47
CMTM3Q96MX0 AC018445.3-201ENST00000624177 1945 ntBASIC17.98■□□□□ 0.47
CMTM3Q96MX0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMTM3Q96MX0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.97■□□□□ 0.47
CMTM3Q96MX0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 AC099778.1-201ENST00000568593 1911 ntBASIC17.96■□□□□ 0.47
CMTM3Q96MX0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 MTDHP2-201ENST00000601468 714 ntBASIC17.96■□□□□ 0.47
CMTM3Q96MX0 AL031848.2-201ENST00000607670 837 ntBASIC17.96■□□□□ 0.47
CMTM3Q96MX0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.96■□□□□ 0.47
CMTM3Q96MX0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 AP006587.3-201ENST00000525742 1516 ntBASIC17.95■□□□□ 0.46
CMTM3Q96MX0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 pRNA.6-201ENST00000610482 90 ntBASIC17.95■□□□□ 0.46
CMTM3Q96MX0 pRNA.5-201ENST00000612139 90 ntBASIC17.95■□□□□ 0.46
CMTM3Q96MX0 pRNA.11-201ENST00000618423 90 ntBASIC17.95■□□□□ 0.46
CMTM3Q96MX0 pRNA.13-201ENST00000619112 90 ntBASIC17.95■□□□□ 0.46
CMTM3Q96MX0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CMTM3Q96MX0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 AL117332.1-201ENST00000622628 974 ntBASIC17.94■□□□□ 0.46
CMTM3Q96MX0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMTM3Q96MX0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms