Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.18■□□□□ 0.82
NCLNQ969V3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 YBX1P1-201ENST00000445822 960 ntBASIC20.18■□□□□ 0.82
NCLNQ969V3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.18■□□□□ 0.82
NCLNQ969V3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.18■□□□□ 0.82
NCLNQ969V3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
NCLNQ969V3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 AC073130.3-201ENST00000624389 2278 ntBASIC20.18■□□□□ 0.82
NCLNQ969V3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCLNQ969V3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.18■□□□□ 0.82
NCLNQ969V3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NCLNQ969V3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NCLNQ969V3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NCLNQ969V3 AC087623.3-201ENST00000607047 1098 ntBASIC20.17■□□□□ 0.82
NCLNQ969V3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NCLNQ969V3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NCLNQ969V3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NCLNQ969V3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLNQ969V3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NCLNQ969V3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLNQ969V3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NCLNQ969V3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLNQ969V3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NCLNQ969V3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.16■□□□□ 0.82
NCLNQ969V3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NCLNQ969V3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.16■□□□□ 0.82
NCLNQ969V3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.16■□□□□ 0.82
NCLNQ969V3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.16■□□□□ 0.82
NCLNQ969V3 AC104564.3-201ENST00000582367 638 ntBASIC20.16■□□□□ 0.82
NCLNQ969V3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.16■□□□□ 0.82
NCLNQ969V3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.16■□□□□ 0.82
NCLNQ969V3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLNQ969V3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLNQ969V3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLNQ969V3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLNQ969V3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLNQ969V3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NCLNQ969V3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.15■□□□□ 0.82
NCLNQ969V3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 OR7E47P-201ENST00000546390 1422 ntBASIC20.15■□□□□ 0.82
NCLNQ969V3 AC026471.6-201ENST00000622954 1905 ntBASIC20.15■□□□□ 0.82
NCLNQ969V3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLNQ969V3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCLNQ969V3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLNQ969V3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NCLNQ969V3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
NCLNQ969V3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.14■□□□□ 0.81
NCLNQ969V3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.14■□□□□ 0.81
NCLNQ969V3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NCLNQ969V3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 AC123595.1-201ENST00000440769 1046 ntBASIC20.14■□□□□ 0.81
NCLNQ969V3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.14■□□□□ 0.81
NCLNQ969V3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.14■□□□□ 0.81
NCLNQ969V3 MIR5787-201ENST00000611784 55 ntBASIC20.14■□□□□ 0.81
NCLNQ969V3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLNQ969V3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCLNQ969V3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCLNQ969V3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCLNQ969V3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCLNQ969V3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCLNQ969V3 BX005040.4-201ENST00000637145 1518 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms