Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 FAM99A-202ENST00000538190 1989 ntBASIC19.68■□□□□ 0.74
TM9SF4Q92544 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF4Q92544 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF4Q92544 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF4Q92544 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF4Q92544 AL050303.2-201ENST00000619798 666 ntBASIC19.67■□□□□ 0.74
TM9SF4Q92544 TMEM191A-211ENST00000637163 1067 ntBASIC19.67■□□□□ 0.74
TM9SF4Q92544 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF4Q92544 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF4Q92544 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.67■□□□□ 0.74
TM9SF4Q92544 AC010542.4-201ENST00000563151 1910 ntBASIC19.66■□□□□ 0.74
TM9SF4Q92544 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF4Q92544 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF4Q92544 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF4Q92544 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 AF201337.1-201ENST00000520239 748 ntBASIC19.66■□□□□ 0.74
TM9SF4Q92544 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF4Q92544 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF4Q92544 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF4Q92544 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF4Q92544 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TM9SF4Q92544 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF4Q92544 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF4Q92544 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF4Q92544 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF4Q92544 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 SLC7A5P2-201ENST00000553010 536 ntBASIC19.65■□□□□ 0.74
TM9SF4Q92544 AC010536.3-201ENST00000620306 533 ntBASIC19.65■□□□□ 0.74
TM9SF4Q92544 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF4Q92544 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF4Q92544 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TM9SF4Q92544 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TM9SF4Q92544 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.64■□□□□ 0.73
TM9SF4Q92544 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF4Q92544 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF4Q92544 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.64■□□□□ 0.73
TM9SF4Q92544 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.64■□□□□ 0.73
TM9SF4Q92544 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.64■□□□□ 0.73
TM9SF4Q92544 AC013268.1-206ENST00000638368 961 ntBASIC19.64■□□□□ 0.73
TM9SF4Q92544 AC112229.1-201ENST00000639295 961 ntBASIC19.64■□□□□ 0.73
TM9SF4Q92544 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.64■□□□□ 0.73
TM9SF4Q92544 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.64■□□□□ 0.73
TM9SF4Q92544 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF4Q92544 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF4Q92544 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 KRT18P6-201ENST00000555540 1265 ntBASIC19.63■□□□□ 0.73
TM9SF4Q92544 SLC7A5P1-201ENST00000568957 537 ntBASIC19.63■□□□□ 0.73
TM9SF4Q92544 AC133552.2-202ENST00000575694 574 ntBASIC19.63■□□□□ 0.73
TM9SF4Q92544 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.63■□□□□ 0.73
TM9SF4Q92544 AC133041.1-202ENST00000642053 222 ntBASIC19.63■□□□□ 0.73
TM9SF4Q92544 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM9SF4Q92544 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms