Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC34.42■■■■□ 3.1
CHMP7Q8WUX9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CHMP7Q8WUX9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
CHMP7Q8WUX9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CHMP7Q8WUX9 AL135905.2-201ENST00000584934 1404 ntBASIC34.41■■■■□ 3.1
CHMP7Q8WUX9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CHMP7Q8WUX9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC34.41■■■■□ 3.1
CHMP7Q8WUX9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CHMP7Q8WUX9 AL023875.1-201ENST00000640777 796 ntBASIC34.41■■■■□ 3.1
CHMP7Q8WUX9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC34.4■■■■□ 3.1
CHMP7Q8WUX9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 C2orf69P4-201ENST00000565394 541 ntBASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CHMP7Q8WUX9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHMP7Q8WUX9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC34.37■■■■□ 3.09
CHMP7Q8WUX9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CHMP7Q8WUX9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
CHMP7Q8WUX9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC34.37■■■■□ 3.09
CHMP7Q8WUX9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC34.37■■■■□ 3.09
CHMP7Q8WUX9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC34.37■■■■□ 3.09
CHMP7Q8WUX9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC34.37■■■■□ 3.09
CHMP7Q8WUX9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC34.36■■■■□ 3.09
CHMP7Q8WUX9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CHMP7Q8WUX9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
CHMP7Q8WUX9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC34.35■■■■□ 3.09
CHMP7Q8WUX9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.35■■■■□ 3.09
CHMP7Q8WUX9 ANOS2P-203ENST00000472227 1816 ntBASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 HES2-205ENST00000487437 968 ntTSL 3 BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 AL353708.3-201ENST00000610272 989 ntBASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
CHMP7Q8WUX9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 AC092068.2-201ENST00000590491 1708 ntBASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 AC239809.2-201ENST00000415381 517 ntBASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC34.33■■■■□ 3.09
CHMP7Q8WUX9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC34.32■■■■□ 3.09
CHMP7Q8WUX9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
CHMP7Q8WUX9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
CHMP7Q8WUX9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CHMP7Q8WUX9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CHMP7Q8WUX9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC34.31■■■■□ 3.08
CHMP7Q8WUX9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC34.31■■■■□ 3.08
CHMP7Q8WUX9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CHMP7Q8WUX9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms