Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF139Q8WU17 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF139Q8WU17 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF139Q8WU17 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.96■■□□□ 1.11
RNF139Q8WU17 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RNF139Q8WU17 MFSD11-216ENST00000590393 1141 ntBASIC21.96■■□□□ 1.11
RNF139Q8WU17 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF139Q8WU17 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF139Q8WU17 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF139Q8WU17 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF139Q8WU17 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF139Q8WU17 SLC7A5P1-201ENST00000568957 537 ntBASIC21.95■■□□□ 1.1
RNF139Q8WU17 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF139Q8WU17 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 RARRES2P11-201ENST00000635158 484 ntBASIC21.95■■□□□ 1.1
RNF139Q8WU17 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 KRT16P2-201ENST00000414673 1423 ntBASIC21.95■■□□□ 1.1
RNF139Q8WU17 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RNF139Q8WU17 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF139Q8WU17 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF139Q8WU17 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF139Q8WU17 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF139Q8WU17 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF139Q8WU17 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF139Q8WU17 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF139Q8WU17 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF139Q8WU17 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
RNF139Q8WU17 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF139Q8WU17 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF139Q8WU17 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF139Q8WU17 Z98882.1-201ENST00000622160 2253 ntBASIC21.93■■□□□ 1.1
RNF139Q8WU17 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF139Q8WU17 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF139Q8WU17 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF139Q8WU17 AC007375.3-201ENST00000600936 2314 ntBASIC21.92■■□□□ 1.1
RNF139Q8WU17 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RNF139Q8WU17 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RNF139Q8WU17 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF139Q8WU17 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.92■■□□□ 1.1
RNF139Q8WU17 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF139Q8WU17 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 AC073111.5-205ENST00000641717 521 ntBASIC21.92■■□□□ 1.1
RNF139Q8WU17 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF139Q8WU17 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF139Q8WU17 CLDN5-201ENST00000403084 2357 ntBASIC21.91■■□□□ 1.1
RNF139Q8WU17 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF139Q8WU17 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF139Q8WU17 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF139Q8WU17 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF139Q8WU17 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF139Q8WU17 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.91■■□□□ 1.1
RNF139Q8WU17 AC010536.3-201ENST00000620306 533 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms