Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD5Q8TDI0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.28■■□□□ 1
CHD5Q8TDI0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.28■■□□□ 1
CHD5Q8TDI0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHD5Q8TDI0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
CHD5Q8TDI0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.28■■□□□ 1
CHD5Q8TDI0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.28■■□□□ 1
CHD5Q8TDI0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD5Q8TDI0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.28■■□□□ 1
CHD5Q8TDI0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHD5Q8TDI0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD5Q8TDI0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.27■■□□□ 1
CHD5Q8TDI0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.27■■□□□ 1
CHD5Q8TDI0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHD5Q8TDI0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD5Q8TDI0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD5Q8TDI0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.27■■□□□ 1
CHD5Q8TDI0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.27■■□□□ 1
CHD5Q8TDI0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CHD5Q8TDI0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD5Q8TDI0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD5Q8TDI0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.27■□□□□ 0.99
CHD5Q8TDI0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD5Q8TDI0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD5Q8TDI0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD5Q8TDI0 AC245052.3-201ENST00000450182 901 ntBASIC21.27■□□□□ 0.99
CHD5Q8TDI0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.26■□□□□ 0.99
CHD5Q8TDI0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 AC080038.1-201ENST00000611274 1154 ntBASIC21.26■□□□□ 0.99
CHD5Q8TDI0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CHD5Q8TDI0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD5Q8TDI0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 TERF1P5-201ENST00000477545 1207 ntBASIC21.24■□□□□ 0.99
CHD5Q8TDI0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CHD5Q8TDI0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 GUSBP6-202ENST00000438529 1198 ntBASIC21.23■□□□□ 0.99
CHD5Q8TDI0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD5Q8TDI0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms