Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.71■■□□□ 1.07
CCHCR1Q8TD31 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CCHCR1Q8TD31 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.7■■□□□ 1.06
CCHCR1Q8TD31 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 AL358852.1-201ENST00000623174 1268 ntBASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCHCR1Q8TD31 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 AL157384.1-201ENST00000445995 2473 ntBASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 AL354811.1-201ENST00000610286 706 ntBASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCHCR1Q8TD31 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.67■■□□□ 1.06
CCHCR1Q8TD31 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 AC012414.1-201ENST00000556676 535 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms