Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 AP004607.4-201ENST00000530158 1459 ntBASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 KRT18P5-201ENST00000436075 1291 ntBASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 AC104187.1-201ENST00000607510 612 ntBASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH19Q8TAB3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH19Q8TAB3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 AC010141.2-201ENST00000452426 721 ntBASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH19Q8TAB3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 AC004854.2-201ENST00000608450 1441 ntBASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 POU5F1P4-201ENST00000413175 1085 ntBASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 AC008175.2-201ENST00000612840 297 ntBASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH19Q8TAB3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 KRT18P61-201ENST00000585825 1298 ntBASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 PLK5-205ENST00000642079 1969 ntBASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH19Q8TAB3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH19Q8TAB3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms