Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PJA1Q8NG27 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PJA1Q8NG27 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PJA1Q8NG27 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.5■■□□□ 1.03
PJA1Q8NG27 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PJA1Q8NG27 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PJA1Q8NG27 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PJA1Q8NG27 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PJA1Q8NG27 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 AC243732.1-201ENST00000612648 864 ntBASIC21.49■■□□□ 1.03
PJA1Q8NG27 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.49■■□□□ 1.03
PJA1Q8NG27 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PJA1Q8NG27 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 AC008403.3-201ENST00000598924 454 ntBASIC21.48■■□□□ 1.03
PJA1Q8NG27 AC073912.3-201ENST00000624414 853 ntBASIC21.48■■□□□ 1.03
PJA1Q8NG27 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PJA1Q8NG27 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PJA1Q8NG27 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PJA1Q8NG27 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PJA1Q8NG27 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.47■■□□□ 1.03
PJA1Q8NG27 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
PJA1Q8NG27 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PJA1Q8NG27 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
PJA1Q8NG27 MIR4497-201ENST00000583208 89 ntBASIC21.47■■□□□ 1.03
PJA1Q8NG27 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.47■■□□□ 1.03
PJA1Q8NG27 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.47■■□□□ 1.03
PJA1Q8NG27 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.47■■□□□ 1.03
PJA1Q8NG27 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PJA1Q8NG27 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PJA1Q8NG27 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PJA1Q8NG27 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
PJA1Q8NG27 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.46■■□□□ 1.03
PJA1Q8NG27 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PJA1Q8NG27 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PJA1Q8NG27 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PJA1Q8NG27 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PJA1Q8NG27 ECEL1P3-201ENST00000427961 737 ntBASIC21.46■■□□□ 1.03
PJA1Q8NG27 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.46■■□□□ 1.03
PJA1Q8NG27 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.46■■□□□ 1.03
PJA1Q8NG27 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.46■■□□□ 1.03
PJA1Q8NG27 FAM197Y4-202ENST00000622692 608 ntBASIC21.46■■□□□ 1.03
PJA1Q8NG27 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PJA1Q8NG27 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PJA1Q8NG27 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PJA1Q8NG27 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.45■■□□□ 1.02
PJA1Q8NG27 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.45■■□□□ 1.02
PJA1Q8NG27 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.45■■□□□ 1.02
PJA1Q8NG27 AC060766.5-201ENST00000590539 871 ntBASIC21.45■■□□□ 1.02
PJA1Q8NG27 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.45■■□□□ 1.02
PJA1Q8NG27 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PJA1Q8NG27 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PJA1Q8NG27 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PJA1Q8NG27 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PJA1Q8NG27 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.44■■□□□ 1.02
PJA1Q8NG27 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.44■■□□□ 1.02
PJA1Q8NG27 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.44■■□□□ 1.02
PJA1Q8NG27 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.44■■□□□ 1.02
PJA1Q8NG27 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.44■■□□□ 1.02
PJA1Q8NG27 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PJA1Q8NG27 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.44■■□□□ 1.02
PJA1Q8NG27 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PJA1Q8NG27 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms