Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC168Q8NDH2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.64■□□□□ 0.42
CCDC168Q8NDH2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.64■□□□□ 0.42
CCDC168Q8NDH2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC168Q8NDH2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 AC113347.1-201ENST00000413321 391 ntBASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 AL023875.1-201ENST00000640777 796 ntBASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC168Q8NDH2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 AL139125.2-201ENST00000623134 1869 ntBASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC168Q8NDH2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 UPK3BP1-201ENST00000428678 509 ntBASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 LINC00526-201ENST00000581067 1875 ntBASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC168Q8NDH2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms