Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 AC138907.5-202ENST00000569484 235 ntBASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 AC104564.3-201ENST00000582367 638 ntBASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf42Q8N5U0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf42Q8N5U0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 AC244015.2-201ENST00000616358 1861 ntBASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf42Q8N5U0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 KRT19P1-201ENST00000405746 1186 ntBASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf42Q8N5U0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf42Q8N5U0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.32■□□□□ 0.36
C11orf42Q8N5U0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C11orf42Q8N5U0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
C11orf42Q8N5U0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf42Q8N5U0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf42Q8N5U0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
C11orf42Q8N5U0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms