Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
DDX60Q8IY21 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.04■■□□□ 1.76
DDX60Q8IY21 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.04■■□□□ 1.76
DDX60Q8IY21 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.04■■□□□ 1.76
DDX60Q8IY21 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX60Q8IY21 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
DDX60Q8IY21 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX60Q8IY21 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX60Q8IY21 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX60Q8IY21 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.03■■□□□ 1.76
DDX60Q8IY21 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX60Q8IY21 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.03■■□□□ 1.76
DDX60Q8IY21 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
DDX60Q8IY21 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
DDX60Q8IY21 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
DDX60Q8IY21 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
DDX60Q8IY21 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX60Q8IY21 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
DDX60Q8IY21 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
DDX60Q8IY21 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX60Q8IY21 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.02■■□□□ 1.76
DDX60Q8IY21 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX60Q8IY21 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX60Q8IY21 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX60Q8IY21 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX60Q8IY21 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.02■■□□□ 1.76
DDX60Q8IY21 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX60Q8IY21 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX60Q8IY21 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX60Q8IY21 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.01■■□□□ 1.75
DDX60Q8IY21 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.01■■□□□ 1.75
DDX60Q8IY21 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX60Q8IY21 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.01■■□□□ 1.75
DDX60Q8IY21 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX60Q8IY21 AC008403.3-201ENST00000598924 454 ntBASIC26.01■■□□□ 1.75
DDX60Q8IY21 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX60Q8IY21 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
DDX60Q8IY21 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX60Q8IY21 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
DDX60Q8IY21 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX60Q8IY21 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX60Q8IY21 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
DDX60Q8IY21 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX60Q8IY21 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
DDX60Q8IY21 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26■■□□□ 1.75
DDX60Q8IY21 AP003097.1-201ENST00000530657 1135 ntBASIC26■■□□□ 1.75
DDX60Q8IY21 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26■■□□□ 1.75
DDX60Q8IY21 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26■■□□□ 1.75
DDX60Q8IY21 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX60Q8IY21 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26■■□□□ 1.75
DDX60Q8IY21 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX60Q8IY21 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX60Q8IY21 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
DDX60Q8IY21 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26■■□□□ 1.75
DDX60Q8IY21 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26■■□□□ 1.75
DDX60Q8IY21 AC060766.5-201ENST00000590539 871 ntBASIC26■■□□□ 1.75
DDX60Q8IY21 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX60Q8IY21 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.99■■□□□ 1.75
DDX60Q8IY21 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.99■■□□□ 1.75
DDX60Q8IY21 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX60Q8IY21 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX60Q8IY21 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.99■■□□□ 1.75
DDX60Q8IY21 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX60Q8IY21 GCSHP5-201ENST00000443090 522 ntBASIC25.99■■□□□ 1.75
DDX60Q8IY21 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
DDX60Q8IY21 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
DDX60Q8IY21 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.98■■□□□ 1.75
DDX60Q8IY21 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
DDX60Q8IY21 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.98■■□□□ 1.75
DDX60Q8IY21 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DDX60Q8IY21 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX60Q8IY21 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX60Q8IY21 AC100791.3-201ENST00000617619 330 ntBASIC25.97■■□□□ 1.75
DDX60Q8IY21 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DDX60Q8IY21 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 KRT18P29-201ENST00000397031 1267 ntBASIC25.97■■□□□ 1.75
DDX60Q8IY21 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX60Q8IY21 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX60Q8IY21 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX60Q8IY21 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms