Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CBWD2Q8IUF1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CBWD2Q8IUF1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CBWD2Q8IUF1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CBWD2Q8IUF1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 AC120498.10-201ENST00000621827 505 ntBASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 MYCNOS-205ENST00000641950 531 ntBASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CBWD2Q8IUF1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
CBWD2Q8IUF1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.74■■□□□ 1.23
CBWD2Q8IUF1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.74■■□□□ 1.23
CBWD2Q8IUF1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CBWD2Q8IUF1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CBWD2Q8IUF1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 AC016769.1-201ENST00000409132 1010 ntBASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CBWD2Q8IUF1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.72■■□□□ 1.23
CBWD2Q8IUF1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 AL049796.1-201ENST00000565336 1766 ntBASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 SLC7A5P1-201ENST00000568957 537 ntBASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CBWD2Q8IUF1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 RARRES2P11-201ENST00000635158 484 ntBASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CBWD2Q8IUF1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 KRT18P11-201ENST00000435214 1283 ntBASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 MFSD11-216ENST00000590393 1141 ntBASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 AC011767.1-201ENST00000617410 1153 ntBASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
CBWD2Q8IUF1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD2Q8IUF1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms