Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 AC121338.2-201ENST00000622535 1744 ntBASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3HC1Q86WB0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.77■□□□□ 0.92
ZC3HC1Q86WB0 SLC25A24-204ENST00000569674 2357 ntBASIC20.77■□□□□ 0.91
ZC3HC1Q86WB0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZC3HC1Q86WB0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 AL358852.1-201ENST00000623174 1268 ntBASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZC3HC1Q86WB0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 AC142381.2-201ENST00000566120 298 ntBASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZC3HC1Q86WB0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 MIR6084-201ENST00000622012 110 ntBASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZC3HC1Q86WB0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms