Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PACS1Q6VY07 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PACS1Q6VY07 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PACS1Q6VY07 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PACS1Q6VY07 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PACS1Q6VY07 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PACS1Q6VY07 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PACS1Q6VY07 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.08■□□□□ 0.97
PACS1Q6VY07 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PACS1Q6VY07 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PACS1Q6VY07 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PACS1Q6VY07 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PACS1Q6VY07 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PACS1Q6VY07 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PACS1Q6VY07 AC123595.1-201ENST00000440769 1046 ntBASIC21.07■□□□□ 0.96
PACS1Q6VY07 YBX1P1-201ENST00000445822 960 ntBASIC21.07■□□□□ 0.96
PACS1Q6VY07 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PACS1Q6VY07 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.07■□□□□ 0.96
PACS1Q6VY07 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.07■□□□□ 0.96
PACS1Q6VY07 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PACS1Q6VY07 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
PACS1Q6VY07 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PACS1Q6VY07 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PACS1Q6VY07 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PACS1Q6VY07 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PACS1Q6VY07 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PACS1Q6VY07 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PACS1Q6VY07 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PACS1Q6VY07 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PACS1Q6VY07 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
PACS1Q6VY07 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.06■□□□□ 0.96
PACS1Q6VY07 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PACS1Q6VY07 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PACS1Q6VY07 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 LINC02228-203ENST00000641970 1355 ntBASIC21.05■□□□□ 0.96
PACS1Q6VY07 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.05■□□□□ 0.96
PACS1Q6VY07 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PACS1Q6VY07 AC019069.1-201ENST00000610008 1333 ntBASIC21.04■□□□□ 0.96
PACS1Q6VY07 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 FEM1AP1-201ENST00000431297 1995 ntBASIC21.04■□□□□ 0.96
PACS1Q6VY07 LINC01006-201ENST00000333319 2292 ntBASIC21.04■□□□□ 0.96
PACS1Q6VY07 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PACS1Q6VY07 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.04■□□□□ 0.96
PACS1Q6VY07 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PACS1Q6VY07 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PACS1Q6VY07 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms