Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
REEP3Q6NUK4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 AP001330.3-201ENST00000520123 633 ntBASIC19.47■□□□□ 0.71
REEP3Q6NUK4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
REEP3Q6NUK4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 MIR572-201ENST00000384983 95 ntBASIC19.46■□□□□ 0.71
REEP3Q6NUK4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
REEP3Q6NUK4 RASA4CP-201ENST00000424092 1398 ntBASIC19.45■□□□□ 0.7
REEP3Q6NUK4 AC121338.2-201ENST00000622535 1744 ntBASIC19.45■□□□□ 0.7
REEP3Q6NUK4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 AL355001.2-201ENST00000620617 1191 ntBASIC19.45■□□□□ 0.7
REEP3Q6NUK4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
REEP3Q6NUK4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.44■□□□□ 0.7
REEP3Q6NUK4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
REEP3Q6NUK4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms