Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 SLC7A5P1-201ENST00000568957 537 ntBASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC144NLQ6NUI1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144NLQ6NUI1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 KRT18P61-201ENST00000585825 1298 ntBASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC144NLQ6NUI1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 AC245052.3-201ENST00000450182 901 ntBASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 Z98882.1-201ENST00000622160 2253 ntBASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC144NLQ6NUI1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 AC061975.6-201ENST00000579045 1553 ntBASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 AC022517.1-201ENST00000592429 346 ntBASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 AL137784.2-201ENST00000607332 1000 ntBASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 MYCNOS-205ENST00000641950 531 ntBASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 AL024507.2-201ENST00000606070 2574 ntBASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC144NLQ6NUI1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms