Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 ABCB10P4-201ENST00000566803 2184 ntBASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 LINC01124-201ENST00000409786 2117 ntBASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.78■■□□□ 1.08
PTCRAQ6ISU1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 AC239809.2-201ENST00000415381 517 ntBASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 AL049597.2-201ENST00000565575 961 ntBASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 AL590326.2-201ENST00000625139 305 ntBASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCRAQ6ISU1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PTCRAQ6ISU1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.77■■□□□ 1.07
PTCRAQ6ISU1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCRAQ6ISU1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 C2orf69P4-201ENST00000565394 541 ntBASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCRAQ6ISU1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTCRAQ6ISU1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 PRKY-204ENST00000533551 1019 ntBASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 AC110285.5-201ENST00000611501 352 ntBASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCRAQ6ISU1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms