Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 AC006015.1-201ENST00000429970 570 ntBASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDLRAP1Q5SW96 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 SLC7A5P1-201ENST00000568957 537 ntBASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 UBE2DNL-204ENST00000602536 740 ntBASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAP1Q5SW96 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 SLC7A5P2-201ENST00000553010 536 ntBASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.77■□□□□ 0.92
LDLRAP1Q5SW96 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LDLRAP1Q5SW96 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
LDLRAP1Q5SW96 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LDLRAP1Q5SW96 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 MYCNOS-205ENST00000641950 531 ntBASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAP1Q5SW96 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 AL137784.2-201ENST00000607332 1000 ntBASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 AC092666.2-201ENST00000613287 246 ntBASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAP1Q5SW96 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 Z98882.1-201ENST00000622160 2253 ntBASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
LDLRAP1Q5SW96 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms