Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
HS1BP3Q53T59 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
HS1BP3Q53T59 AC120024.1-201ENST00000562672 995 ntBASIC23.36■■□□□ 1.33
HS1BP3Q53T59 AC137630.3-201ENST00000607245 391 ntBASIC23.36■■□□□ 1.33
HS1BP3Q53T59 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HS1BP3Q53T59 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
HS1BP3Q53T59 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
HS1BP3Q53T59 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HS1BP3Q53T59 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 TSPY9P-201ENST00000440215 945 ntBASIC23.35■■□□□ 1.33
HS1BP3Q53T59 TSPY11P-201ENST00000442607 1045 ntBASIC23.35■■□□□ 1.33
HS1BP3Q53T59 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HS1BP3Q53T59 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HS1BP3Q53T59 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 AP000974.1-201ENST00000623909 2387 ntBASIC23.33■■□□□ 1.33
HS1BP3Q53T59 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.33■■□□□ 1.33
HS1BP3Q53T59 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.33■■□□□ 1.32
HS1BP3Q53T59 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HS1BP3Q53T59 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.33■■□□□ 1.32
HS1BP3Q53T59 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
HS1BP3Q53T59 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 AC099778.1-201ENST00000568593 1911 ntBASIC23.32■■□□□ 1.32
HS1BP3Q53T59 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 UNC93B8-201ENST00000511903 705 ntBASIC23.32■■□□□ 1.32
HS1BP3Q53T59 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 LETM1P2-201ENST00000597330 2178 ntBASIC23.32■■□□□ 1.32
HS1BP3Q53T59 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HS1BP3Q53T59 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 AL512408.1-201ENST00000569378 2000 ntBASIC23.31■■□□□ 1.32
HS1BP3Q53T59 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HS1BP3Q53T59 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms