Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM60Q495X7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM60Q495X7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
TRIM60Q495X7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM60Q495X7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM60Q495X7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM60Q495X7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM60Q495X7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM60Q495X7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM60Q495X7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIM60Q495X7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
TRIM60Q495X7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 TSPY7P-201ENST00000431358 1114 ntBASIC23.1■■□□□ 1.29
TRIM60Q495X7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.1■■□□□ 1.29
TRIM60Q495X7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.1■■□□□ 1.29
TRIM60Q495X7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM60Q495X7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.1■■□□□ 1.29
TRIM60Q495X7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM60Q495X7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM60Q495X7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM60Q495X7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM60Q495X7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM60Q495X7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TRIM60Q495X7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM60Q495X7 KRT18P68-201ENST00000392293 1000 ntBASIC23.09■■□□□ 1.29
TRIM60Q495X7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM60Q495X7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.09■■□□□ 1.29
TRIM60Q495X7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM60Q495X7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM60Q495X7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM60Q495X7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM60Q495X7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM60Q495X7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM60Q495X7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM60Q495X7 AC012618.2-201ENST00000428058 849 ntBASIC23.08■■□□□ 1.29
TRIM60Q495X7 AC245052.3-201ENST00000450182 901 ntBASIC23.08■■□□□ 1.29
TRIM60Q495X7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TRIM60Q495X7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.08■■□□□ 1.29
TRIM60Q495X7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM60Q495X7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM60Q495X7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.08■■□□□ 1.28
TRIM60Q495X7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM60Q495X7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.28
TRIM60Q495X7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 POM121L13P-201ENST00000422362 380 ntBASIC23.07■■□□□ 1.28
TRIM60Q495X7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 AC233702.5-201ENST00000584107 538 ntBASIC23.07■■□□□ 1.28
TRIM60Q495X7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
TRIM60Q495X7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM60Q495X7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM60Q495X7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIM60Q495X7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.06■■□□□ 1.28
TRIM60Q495X7 RPS2P55-201ENST00000397318 883 ntBASIC23.06■■□□□ 1.28
TRIM60Q495X7 AC107956.1-201ENST00000494359 873 ntBASIC23.06■■□□□ 1.28
TRIM60Q495X7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.06■■□□□ 1.28
TRIM60Q495X7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
TRIM60Q495X7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TRIM60Q495X7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TRIM60Q495X7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM60Q495X7 AC003102.1-202ENST00000563394 1796 ntBASIC23.06■■□□□ 1.28
TRIM60Q495X7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM60Q495X7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM60Q495X7 AC087742.1-201ENST00000575880 1738 ntBASIC23.05■■□□□ 1.28
TRIM60Q495X7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM60Q495X7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM60Q495X7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM60Q495X7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TRIM60Q495X7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM60Q495X7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM60Q495X7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.05■■□□□ 1.28
TRIM60Q495X7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.05■■□□□ 1.28
TRIM60Q495X7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM60Q495X7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM60Q495X7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM60Q495X7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM60Q495X7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM60Q495X7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms