Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
LRRK1Q38SD2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.77■□□□□ 0.91
LRRK1Q38SD2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.77■□□□□ 0.91
LRRK1Q38SD2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
LRRK1Q38SD2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.77■□□□□ 0.91
LRRK1Q38SD2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK1Q38SD2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 AC245052.3-201ENST00000450182 901 ntBASIC20.75■□□□□ 0.91
LRRK1Q38SD2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRK1Q38SD2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 AL355472.2-201ENST00000422958 438 ntBASIC20.74■□□□□ 0.91
LRRK1Q38SD2 TSPY6P-201ENST00000448518 926 ntBASIC20.74■□□□□ 0.91
LRRK1Q38SD2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LRRK1Q38SD2 FBXW4P1-201ENST00000426721 2239 ntBASIC20.74■□□□□ 0.91
LRRK1Q38SD2 AC083906.2-201ENST00000511578 360 ntBASIC20.73■□□□□ 0.91
LRRK1Q38SD2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 Z98882.1-201ENST00000622160 2253 ntBASIC20.73■□□□□ 0.91
LRRK1Q38SD2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 OR10C1-204ENST00000622521 1039 ntBASIC20.73■□□□□ 0.91
LRRK1Q38SD2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRRK1Q38SD2 AC010980.2-201ENST00000587099 1412 ntBASIC20.73■□□□□ 0.91
LRRK1Q38SD2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 AC244015.2-201ENST00000616358 1861 ntBASIC20.72■□□□□ 0.91
LRRK1Q38SD2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 AC105036.2-201ENST00000569468 176 ntBASIC20.72■□□□□ 0.91
LRRK1Q38SD2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK1Q38SD2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 AC083880.1-201ENST00000608266 535 ntBASIC20.71■□□□□ 0.91
LRRK1Q38SD2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRRK1Q38SD2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms