Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.42■□□□□ 0.86
HLA-BQ31612 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-BQ31612 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HLA-BQ31612 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-BQ31612 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-BQ31612 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
HLA-BQ31612 AC092368.3-202ENST00000574180 1591 ntBASIC20.42■□□□□ 0.86
HLA-BQ31612 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HLA-BQ31612 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.41■□□□□ 0.86
HLA-BQ31612 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
HLA-BQ31612 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.41■□□□□ 0.86
HLA-BQ31612 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-BQ31612 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-BQ31612 MIR718-201ENST00000390190 70 ntBASIC20.41■□□□□ 0.86
HLA-BQ31612 KRT18P68-201ENST00000392293 1000 ntBASIC20.41■□□□□ 0.86
HLA-BQ31612 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-BQ31612 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-BQ31612 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-BQ31612 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.41■□□□□ 0.86
HLA-BQ31612 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
HLA-BQ31612 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.41■□□□□ 0.86
HLA-BQ31612 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HLA-BQ31612 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-BQ31612 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HLA-BQ31612 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.41■□□□□ 0.86
HLA-BQ31612 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.41■□□□□ 0.86
HLA-BQ31612 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-BQ31612 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-BQ31612 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-BQ31612 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-BQ31612 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-BQ31612 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-BQ31612 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-BQ31612 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.4■□□□□ 0.86
HLA-BQ31612 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.4■□□□□ 0.86
HLA-BQ31612 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HLA-BQ31612 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.4■□□□□ 0.86
HLA-BQ31612 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-BQ31612 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
HLA-BQ31612 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 C11orf96-202ENST00000528572 1834 ntBASIC20.39■□□□□ 0.86
HLA-BQ31612 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-BQ31612 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-BQ31612 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-BQ31612 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HLA-BQ31612 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-BQ31612 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.39■□□□□ 0.85
HLA-BQ31612 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.39■□□□□ 0.85
HLA-BQ31612 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-BQ31612 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-BQ31612 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-BQ31612 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-BQ31612 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-BQ31612 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-BQ31612 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-BQ31612 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-BQ31612 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HLA-BQ31612 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-BQ31612 RN7SL471P-201ENST00000580476 299 ntBASIC20.38■□□□□ 0.85
HLA-BQ31612 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-BQ31612 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HLA-BQ31612 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HLA-BQ31612 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-BQ31612 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-BQ31612 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-BQ31612 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-BQ31612 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
HLA-BQ31612 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.37■□□□□ 0.85
HLA-BQ31612 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-BQ31612 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-BQ31612 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-BQ31612 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-BQ31612 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HLA-BQ31612 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.37■□□□□ 0.85
HLA-BQ31612 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-BQ31612 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HLA-BQ31612 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-BQ31612 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
HLA-BQ31612 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.36■□□□□ 0.85
HLA-BQ31612 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.36■□□□□ 0.85
HLA-BQ31612 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-BQ31612 MIR4497-201ENST00000583208 89 ntBASIC20.36■□□□□ 0.85
HLA-BQ31612 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-BQ31612 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-BQ31612 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-BQ31612 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-BQ31612 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms