Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC37.41■■■■□ 3.58
HMGXB3Q12766 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC37.41■■■■□ 3.58
HMGXB3Q12766 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC37.4■■■■□ 3.58
HMGXB3Q12766 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC37.4■■■■□ 3.58
HMGXB3Q12766 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
HMGXB3Q12766 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC37.4■■■■□ 3.58
HMGXB3Q12766 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC37.4■■■■□ 3.58
HMGXB3Q12766 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC37.39■■■■□ 3.58
HMGXB3Q12766 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
HMGXB3Q12766 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
HMGXB3Q12766 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
HMGXB3Q12766 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC37.38■■■■□ 3.57
HMGXB3Q12766 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
HMGXB3Q12766 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
HMGXB3Q12766 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC37.37■■■■□ 3.57
HMGXB3Q12766 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC37.37■■■■□ 3.57
HMGXB3Q12766 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC37.37■■■■□ 3.57
HMGXB3Q12766 MFF-205ENST00000354503 1085 ntTSL 2 BASIC37.37■■■■□ 3.57
HMGXB3Q12766 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC37.37■■■■□ 3.57
HMGXB3Q12766 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC37.37■■■■□ 3.57
HMGXB3Q12766 AC245052.3-201ENST00000450182 901 ntBASIC37.37■■■■□ 3.57
HMGXB3Q12766 TSPY15P-201ENST00000457163 923 ntBASIC37.37■■■■□ 3.57
HMGXB3Q12766 LY6E-205ENST00000519611 635 ntTSL 3 BASIC37.37■■■■□ 3.57
HMGXB3Q12766 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC37.37■■■■□ 3.57
HMGXB3Q12766 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
HMGXB3Q12766 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC37.37■■■■□ 3.57
HMGXB3Q12766 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
HMGXB3Q12766 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
HMGXB3Q12766 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
HMGXB3Q12766 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC37.36■■■■□ 3.57
HMGXB3Q12766 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
HMGXB3Q12766 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
HMGXB3Q12766 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC37.36■■■■□ 3.57
HMGXB3Q12766 AC137767.1-201ENST00000602918 1920 ntBASIC37.36■■■■□ 3.57
HMGXB3Q12766 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC37.36■■■■□ 3.57
HMGXB3Q12766 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC37.36■■■■□ 3.57
HMGXB3Q12766 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
HMGXB3Q12766 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC37.36■■■■□ 3.57
HMGXB3Q12766 VMO1-204ENST00000441199 741 ntTSL 2 BASIC37.36■■■■□ 3.57
HMGXB3Q12766 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
HMGXB3Q12766 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
HMGXB3Q12766 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
HMGXB3Q12766 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
HMGXB3Q12766 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
HMGXB3Q12766 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC37.35■■■■□ 3.57
HMGXB3Q12766 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC37.34■■■■□ 3.57
HMGXB3Q12766 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
HMGXB3Q12766 RN7SL850P-201ENST00000579959 291 ntBASIC37.34■■■■□ 3.57
HMGXB3Q12766 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
HMGXB3Q12766 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC37.33■■■■□ 3.57
HMGXB3Q12766 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC37.33■■■■□ 3.57
HMGXB3Q12766 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC37.33■■■■□ 3.57
HMGXB3Q12766 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC37.33■■■■□ 3.57
HMGXB3Q12766 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
HMGXB3Q12766 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC37.32■■■■□ 3.57
HMGXB3Q12766 AC239809.2-201ENST00000415381 517 ntBASIC37.32■■■■□ 3.57
HMGXB3Q12766 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC37.32■■■■□ 3.57
HMGXB3Q12766 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.57
HMGXB3Q12766 CD177P1-201ENST00000606252 935 ntBASIC37.32■■■■□ 3.57
HMGXB3Q12766 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.57
HMGXB3Q12766 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC37.32■■■■□ 3.57
HMGXB3Q12766 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
HMGXB3Q12766 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC37.32■■■■□ 3.56
HMGXB3Q12766 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC37.32■■■■□ 3.56
HMGXB3Q12766 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC37.31■■■■□ 3.56
HMGXB3Q12766 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC37.31■■■■□ 3.56
HMGXB3Q12766 AL135905.2-201ENST00000584934 1404 ntBASIC37.31■■■■□ 3.56
HMGXB3Q12766 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
HMGXB3Q12766 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC37.31■■■■□ 3.56
HMGXB3Q12766 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC37.31■■■■□ 3.56
HMGXB3Q12766 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC37.31■■■■□ 3.56
HMGXB3Q12766 CYP21A1P-202ENST00000354927 1481 ntBASIC37.31■■■■□ 3.56
HMGXB3Q12766 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC37.31■■■■□ 3.56
HMGXB3Q12766 KRT18P68-201ENST00000392293 1000 ntBASIC37.31■■■■□ 3.56
HMGXB3Q12766 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC37.31■■■■□ 3.56
HMGXB3Q12766 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC37.31■■■■□ 3.56
HMGXB3Q12766 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC37.31■■■■□ 3.56
HMGXB3Q12766 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC37.3■■■■□ 3.56
HMGXB3Q12766 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
HMGXB3Q12766 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
HMGXB3Q12766 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
HMGXB3Q12766 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
HMGXB3Q12766 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
HMGXB3Q12766 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC37.3■■■■□ 3.56
HMGXB3Q12766 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC37.3■■■■□ 3.56
HMGXB3Q12766 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC37.3■■■■□ 3.56
HMGXB3Q12766 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
HMGXB3Q12766 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
HMGXB3Q12766 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
HMGXB3Q12766 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
HMGXB3Q12766 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC37.29■■■■□ 3.56
HMGXB3Q12766 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC37.29■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms