Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 TOM1YDR457W 9807 nt2.73□□□□□ -1.97
DDC1Q08949 BUB1YGR188C 3066 nt2.73□□□□□ -1.97
DDC1Q08949 DNA2YHR164C 4569 nt2.72□□□□□ -1.97
DDC1Q08949 SKT5YBL061C 2091 nt2.72□□□□□ -1.97
DDC1Q08949 YCR045W-AYCR045W-A 351 nt2.72□□□□□ -1.97
DDC1Q08949 snR68snR68 136 nt2.72□□□□□ -1.97
DDC1Q08949 YGR283CYGR283C 1026 nt2.72□□□□□ -1.97
DDC1Q08949 YLL037WYLL037W 381 nt2.72□□□□□ -1.97
DDC1Q08949 ENV10YLR065C 546 nt2.72□□□□□ -1.97
DDC1Q08949 YMR158C-AYMR158C-A 138 nt2.72□□□□□ -1.97
DDC1Q08949 YOL114CYOL114C 609 nt2.72□□□□□ -1.97
DDC1Q08949 LTP1YPR073C 486 nt2.72□□□□□ -1.97
DDC1Q08949 AXL1YPR122W 3627 nt2.72□□□□□ -1.97
DDC1Q08949 VPS3YDR495C 3036 nt2.71□□□□□ -1.97
DDC1Q08949 CDC55YGL190C 1581 nt2.71□□□□□ -1.98
DDC1Q08949 FKS3YMR306W 5358 nt2.71□□□□□ -1.98
DDC1Q08949 SRP68YPL243W 1800 nt2.71□□□□□ -1.98
DDC1Q08949 YGL230CYGL230C 444 nt2.71□□□□□ -1.98
DDC1Q08949 YGL242CYGL242C 546 nt2.71□□□□□ -1.98
DDC1Q08949 YHR032W-AYHR032W-A 180 nt2.71□□□□□ -1.98
DDC1Q08949 PEX18YHR160C 852 nt2.71□□□□□ -1.98
DDC1Q08949 RPL20AYMR242C 519 nt2.71□□□□□ -1.98
DDC1Q08949 YNL276CYNL276C 396 nt2.71□□□□□ -1.98
DDC1Q08949 TSR4YOL022C 1227 nt2.71□□□□□ -1.98
DDC1Q08949 YPL135C-AYPL135C-A 174 nt2.71□□□□□ -1.98
DDC1Q08949 MED8YBR193C 672 nt2.71□□□□□ -1.98
DDC1Q08949 MET5YJR137C 4329 nt2.71□□□□□ -1.98
DDC1Q08949 PRP8YHR165C 7242 nt2.71□□□□□ -1.98
DDC1Q08949 MPS1YDL028C 2295 nt2.71□□□□□ -1.98
DDC1Q08949 HFM1YGL251C 3564 nt2.71□□□□□ -1.98
DDC1Q08949 TCB2YNL087W 3537 nt2.71□□□□□ -1.98
DDC1Q08949 RUB1YDR139C 234 nt2.7□□□□□ -1.98
DDC1Q08949 YDR209CYDR209C 414 nt2.7□□□□□ -1.98
DDC1Q08949 RTT105YER104W 627 nt2.7□□□□□ -1.98
DDC1Q08949 OST5YGL226C-A 261 nt2.7□□□□□ -1.98
DDC1Q08949 COX6YHR051W 447 nt2.7□□□□□ -1.98
DDC1Q08949 RPS22AYJL190C 393 nt2.7□□□□□ -1.98
DDC1Q08949 YKL065W-AYKL065W-A 222 nt2.7□□□□□ -1.98
DDC1Q08949 YBL055CYBL055C 1257 nt2.7□□□□□ -1.98
DDC1Q08949 YNL109WYNL109W 546 nt2.7□□□□□ -1.98
DDC1Q08949 YOL106WYOL106W 354 nt2.7□□□□□ -1.98
DDC1Q08949 IPP1YBR011C 864 nt2.7□□□□□ -1.98
DDC1Q08949 HUA2YOR284W 732 nt2.7□□□□□ -1.98
DDC1Q08949 snR43snR43 209 nt2.7□□□□□ -1.98
DDC1Q08949 MUS81YDR386W 1899 nt2.7□□□□□ -1.98
DDC1Q08949 TPO5YKL174C 1857 nt2.7□□□□□ -1.98
DDC1Q08949 PEX6YNL329C 3093 nt2.7□□□□□ -1.98
DDC1Q08949 NAB6YML117W 3405 nt2.7□□□□□ -1.98
DDC1Q08949 YCG1YDR325W 3108 nt2.7□□□□□ -1.98
DDC1Q08949 GYL1YMR192W 2163 nt2.7□□□□□ -1.98
DDC1Q08949 SLH1YGR271W 5904 nt2.7□□□□□ -1.98
DDC1Q08949 NMA111YNL123W 2994 nt2.7□□□□□ -1.98
DDC1Q08949 SPP382YLR424W 2127 nt2.69□□□□□ -1.98
DDC1Q08949 CBP2YHL038C 1893 nt2.69□□□□□ -1.98
DDC1Q08949 MNT3YIL014W 1893 nt2.69□□□□□ -1.98
DDC1Q08949 RPL13AYDL082W 600 nt2.69□□□□□ -1.98
DDC1Q08949 FIN1YDR130C 876 nt2.69□□□□□ -1.98
DDC1Q08949 COG7YGL005C 840 nt2.69□□□□□ -1.98
DDC1Q08949 YIL174WYIL174W 228 nt2.69□□□□□ -1.98
DDC1Q08949 YAL016C-BYAL016C-B 186 nt2.69□□□□□ -1.98
DDC1Q08949 YJL222W-AYJL222W-A 228 nt2.69□□□□□ -1.98
DDC1Q08949 YKL066WYKL066W 444 nt2.69□□□□□ -1.98
DDC1Q08949 NEW1YPL226W 3591 nt2.69□□□□□ -1.98
DDC1Q08949 KIN82YCR091W 2163 nt2.68□□□□□ -1.98
DDC1Q08949 POL4YCR014C 1749 nt2.68□□□□□ -1.98
DDC1Q08949 TVP15YDR100W 432 nt2.68□□□□□ -1.98
DDC1Q08949 GUK1YDR454C 564 nt2.68□□□□□ -1.98
DDC1Q08949 SEC4YFL005W 648 nt2.68□□□□□ -1.98
DDC1Q08949 PNC1YGL037C 651 nt2.68□□□□□ -1.98
DDC1Q08949 SVP26YHR181W 687 nt2.68□□□□□ -1.98
DDC1Q08949 RPL6BYLR448W 531 nt2.68□□□□□ -1.98
DDC1Q08949 YBL068W-AYBL068W-A 237 nt2.68□□□□□ -1.98
DDC1Q08949 MER1YNL210W 813 nt2.68□□□□□ -1.98
DDC1Q08949 TPT1YOL102C 693 nt2.68□□□□□ -1.98
DDC1Q08949 YOR366WYOR366W 354 nt2.68□□□□□ -1.98
DDC1Q08949 YOR387CYOR387C 621 nt2.68□□□□□ -1.98
DDC1Q08949 GRX5YPL059W 453 nt2.68□□□□□ -1.98
DDC1Q08949 RPL36BYPL249C-A 303 nt2.68□□□□□ -1.98
DDC1Q08949 YGL176CYGL176C 1665 nt2.68□□□□□ -1.98
DDC1Q08949 EXO84YBR102C 2262 nt2.68□□□□□ -1.98
DDC1Q08949 CAF120YNL278W 3183 nt2.68□□□□□ -1.98
DDC1Q08949 UTP14YML093W 2700 nt2.68□□□□□ -1.98
DDC1Q08949 NAB3YPL190C 2409 nt2.68□□□□□ -1.98
DDC1Q08949 YNL011CYNL011C 1335 nt2.68□□□□□ -1.98
DDC1Q08949 21S_rRNA21S_rRNA 3296 nt2.67□□□□□ -1.98
DDC1Q08949 SAP1YER047C 2694 nt2.67□□□□□ -1.98
DDC1Q08949 CIK1YMR198W 1785 nt2.67□□□□□ -1.98
DDC1Q08949 YPD1YDL235C 504 nt2.67□□□□□ -1.98
DDC1Q08949 YFH7YFR007W 1062 nt2.67□□□□□ -1.98
DDC1Q08949 RPB9YGL070C 369 nt2.67□□□□□ -1.98
DDC1Q08949 YIP5YGL161C 933 nt2.67□□□□□ -1.98
DDC1Q08949 EFG1YGR271C-A 702 nt2.67□□□□□ -1.98
DDC1Q08949 RPL27AYHR010W 411 nt2.67□□□□□ -1.98
DDC1Q08949 YHR213WYHR213W 597 nt2.67□□□□□ -1.98
DDC1Q08949 YAR062WYAR062W 597 nt2.67□□□□□ -1.98
DDC1Q08949 SMD2YLR275W 333 nt2.67□□□□□ -1.98
DDC1Q08949 CUP9YPL177C 921 nt2.67□□□□□ -1.98
DDC1Q08949 BNI4YNL233W 2679 nt2.66□□□□□ -1.98
DDC1Q08949 HAA1YPR008W 2085 nt2.66□□□□□ -1.98
DDC1Q08949 YCR099CYCR099C 468 nt2.66□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms