Protein–RNA interactions for Protein: Q05541

NSE3, Non-structural maintenance of chromosome element 3, yeastyeast

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NSE3Q05541 YMR122W-AYMR122W-A 255 nt4.28□□□□□ -1.72
NSE3Q05541 ARG2YJL071W 1725 nt4.28□□□□□ -1.72
NSE3Q05541 TGL3YMR313C 1929 nt4.28□□□□□ -1.72
NSE3Q05541 SSE2YBR169C 2082 nt4.28□□□□□ -1.72
NSE3Q05541 CDC40YDR364C 1368 nt4.27□□□□□ -1.73
NSE3Q05541 RIM13YMR154C 2184 nt4.27□□□□□ -1.73
NSE3Q05541 SHQ1YIL104C 1524 nt4.27□□□□□ -1.73
NSE3Q05541 MUB1YMR100W 1863 nt4.27□□□□□ -1.73
NSE3Q05541 CHZ1YER030W 462 nt4.27□□□□□ -1.73
NSE3Q05541 YJL007CYJL007C 315 nt4.27□□□□□ -1.73
NSE3Q05541 TIR2YOR010C 756 nt4.27□□□□□ -1.73
NSE3Q05541 SPC29YPL124W 762 nt4.27□□□□□ -1.73
NSE3Q05541 TMA108YIL137C 2841 nt4.27□□□□□ -1.73
NSE3Q05541 15S_rRNA15S_rRNA 1649 nt4.27□□□□□ -1.73
NSE3Q05541 ERG11YHR007C 1593 nt4.27□□□□□ -1.73
NSE3Q05541 MPS1YDL028C 2295 nt4.26□□□□□ -1.73
NSE3Q05541 PEX5YDR244W 1839 nt4.26□□□□□ -1.73
NSE3Q05541 RPS13YDR064W 456 nt4.26□□□□□ -1.73
NSE3Q05541 YER175W-AYER175W-A 165 nt4.26□□□□□ -1.73
NSE3Q05541 MIC19YFR011C 513 nt4.26□□□□□ -1.73
NSE3Q05541 RPL11BYGR085C 525 nt4.26□□□□□ -1.73
NSE3Q05541 BET4YJL031C 984 nt4.26□□□□□ -1.73
NSE3Q05541 YKL156C-AYKL156C-A 117 nt4.26□□□□□ -1.73
NSE3Q05541 UBX4YMR067C 1251 nt4.26□□□□□ -1.73
NSE3Q05541 RIM11YMR139W 1113 nt4.26□□□□□ -1.73
NSE3Q05541 RPS16AYMR143W 432 nt4.26□□□□□ -1.73
NSE3Q05541 RRT1YBL048W 312 nt4.26□□□□□ -1.73
NSE3Q05541 RPL11AYPR102C 525 nt4.26□□□□□ -1.73
NSE3Q05541 SHS1YDL225W 1656 nt4.26□□□□□ -1.73
NSE3Q05541 ATP25YMR098C 1839 nt4.25□□□□□ -1.73
NSE3Q05541 YOR343W-AYOR343W-A 1317 nt4.25□□□□□ -1.73
NSE3Q05541 STI1YOR027W 1770 nt4.25□□□□□ -1.73
NSE3Q05541 YGR237CYGR237C 2358 nt4.25□□□□□ -1.73
NSE3Q05541 BTT1YDR252W 450 nt4.25□□□□□ -1.73
NSE3Q05541 YEL032C-AYEL032C-A 162 nt4.25□□□□□ -1.73
NSE3Q05541 SWC4YGR002C 1431 nt4.25□□□□□ -1.73
NSE3Q05541 MVB12YGR206W 306 nt4.25□□□□□ -1.73
NSE3Q05541 RED1YLR263W 2484 nt4.25□□□□□ -1.73
NSE3Q05541 DYN3YMR299C 939 nt4.25□□□□□ -1.73
NSE3Q05541 SWS2YNL081C 432 nt4.25□□□□□ -1.73
NSE3Q05541 TPK2YPL203W 1143 nt4.25□□□□□ -1.73
NSE3Q05541 YDR061WYDR061W 1620 nt4.24□□□□□ -1.73
NSE3Q05541 MAK5YBR142W 2322 nt4.24□□□□□ -1.73
NSE3Q05541 GAL80YML051W 1308 nt4.24□□□□□ -1.73
NSE3Q05541 ULS1YOR191W 4860 nt4.24□□□□□ -1.73
NSE3Q05541 PIM1YBL022C 3402 nt4.24□□□□□ -1.73
NSE3Q05541 OPI6YDL096C 327 nt4.24□□□□□ -1.73
NSE3Q05541 YDR115WYDR115W 318 nt4.24□□□□□ -1.73
NSE3Q05541 tC(GCA)BtC(GCA)B 72 nt4.24□□□□□ -1.73
NSE3Q05541 tC(GCA)GtC(GCA)G 72 nt4.24□□□□□ -1.73
NSE3Q05541 tC(GCA)P1tC(GCA)P1 72 nt4.24□□□□□ -1.73
NSE3Q05541 tC(GCA)P2tC(GCA)P2 72 nt4.24□□□□□ -1.73
NSE3Q05541 MXR1YER042W 555 nt4.24□□□□□ -1.73
NSE3Q05541 YGR073CYGR073C 372 nt4.24□□□□□ -1.73
NSE3Q05541 YHR213WYHR213W 597 nt4.24□□□□□ -1.73
NSE3Q05541 ACF4YJR083C 930 nt4.24□□□□□ -1.73
NSE3Q05541 TDA8YAL064C-A 381 nt4.24□□□□□ -1.73
NSE3Q05541 YAR062WYAR062W 597 nt4.24□□□□□ -1.73
NSE3Q05541 BER1YLR412W 825 nt4.24□□□□□ -1.73
NSE3Q05541 YBL039W-BYBL039W-B 180 nt4.24□□□□□ -1.73
NSE3Q05541 YPL205CYPL205C 345 nt4.24□□□□□ -1.73
NSE3Q05541 TOP1YOL006C 2310 nt4.24□□□□□ -1.73
NSE3Q05541 CCM1YGR150C 2595 nt4.23□□□□□ -1.73
NSE3Q05541 VPS74YDR372C 1038 nt4.23□□□□□ -1.73
NSE3Q05541 tK(UUU)DtK(UUU)D 73 nt4.23□□□□□ -1.73
NSE3Q05541 tK(UUU)G1tK(UUU)G1 73 nt4.23□□□□□ -1.73
NSE3Q05541 tK(UUU)G2tK(UUU)G2 73 nt4.23□□□□□ -1.73
NSE3Q05541 tK(UUU)KtK(UUU)K 73 nt4.23□□□□□ -1.73
NSE3Q05541 tK(UUU)LtK(UUU)L 73 nt4.23□□□□□ -1.73
NSE3Q05541 tK(UUU)OtK(UUU)O 73 nt4.23□□□□□ -1.73
NSE3Q05541 tK(UUU)PtK(UUU)P 73 nt4.23□□□□□ -1.73
NSE3Q05541 YFR054CYFR054C 579 nt4.23□□□□□ -1.73
NSE3Q05541 RPL1BYGL135W 654 nt4.23□□□□□ -1.73
NSE3Q05541 CSE4YKL049C 690 nt4.23□□□□□ -1.73
NSE3Q05541 YOR073W-AYOR073W-A 234 nt4.23□□□□□ -1.73
NSE3Q05541 RPL1AYPL220W 654 nt4.23□□□□□ -1.73
NSE3Q05541 MSH4YFL003C 2637 nt4.23□□□□□ -1.73
NSE3Q05541 YJL132WYJL132W 2253 nt4.23□□□□□ -1.73
NSE3Q05541 VHS3YOR054C 2025 nt4.22□□□□□ -1.73
NSE3Q05541 TRS85YDR108W 2097 nt4.22□□□□□ -1.73
NSE3Q05541 YJR157WYJR157W 363 nt4.22□□□□□ -1.73
NSE3Q05541 PDS5YMR076C 3834 nt4.22□□□□□ -1.73
NSE3Q05541 ELM1YKL048C 1923 nt4.22□□□□□ -1.73
NSE3Q05541 PPZ1YML016C 2079 nt4.22□□□□□ -1.73
NSE3Q05541 YNR063WYNR063W 1824 nt4.21□□□□□ -1.74
NSE3Q05541 SRO7YPR032W 3102 nt4.21□□□□□ -1.74
NSE3Q05541 MRPL11YDL202W 750 nt4.21□□□□□ -1.74
NSE3Q05541 AIM11YER093C-A 414 nt4.21□□□□□ -1.74
NSE3Q05541 RPS8BYER102W 603 nt4.21□□□□□ -1.74
NSE3Q05541 YGR045CYGR045C 363 nt4.21□□□□□ -1.74
NSE3Q05541 PDX1YGR193C 1233 nt4.21□□□□□ -1.74
NSE3Q05541 YJL086CYJL086C 369 nt4.21□□□□□ -1.74
NSE3Q05541 YLR264C-AYLR264C-A 117 nt4.21□□□□□ -1.74
NSE3Q05541 RPS8AYBL072C 603 nt4.21□□□□□ -1.74
NSE3Q05541 PHO80YOL001W 882 nt4.21□□□□□ -1.74
NSE3Q05541 YPR053CYPR053C 456 nt4.21□□□□□ -1.74
NSE3Q05541 YDL176WYDL176W 2127 nt4.21□□□□□ -1.74
NSE3Q05541 FRE8YLR047C 2061 nt4.2□□□□□ -1.74
NSE3Q05541 UBP5YER144C 2418 nt4.2□□□□□ -1.74
NSE3Q05541 YDL050CYDL050C 372 nt4.2□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 34.4 ms