Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 AC233992.3-201ENST00000607491 485 ntBASIC15.91■□□□□ 0.14
HIST1H1AQ02539 LINC01521-201ENST00000504184 1943 ntBASIC15.91■□□□□ 0.14
HIST1H1AQ02539 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.91■□□□□ 0.14
HIST1H1AQ02539 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H1AQ02539 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 AC096631.2-201ENST00000436136 790 ntBASIC15.89■□□□□ 0.13
HIST1H1AQ02539 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 AC008764.7-201ENST00000593779 1081 ntBASIC15.89■□□□□ 0.13
HIST1H1AQ02539 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H1AQ02539 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1AQ02539 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms