Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H3AP68431 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H3AP68431 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 KRT18P14-201ENST00000534205 1250 ntBASIC18.25■□□□□ 0.51
HIST1H3AP68431 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HIST1H3AP68431 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H3AP68431 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HIST1H3AP68431 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H3AP68431 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H3AP68431 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.24■□□□□ 0.51
HIST1H3AP68431 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.24■□□□□ 0.51
HIST1H3AP68431 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HIST1H3AP68431 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H3AP68431 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H3AP68431 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H3AP68431 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H3AP68431 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H3AP68431 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 AC104187.1-201ENST00000607510 612 ntBASIC18.23■□□□□ 0.51
HIST1H3AP68431 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H3AP68431 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H3AP68431 KRT16P2-201ENST00000414673 1423 ntBASIC18.23■□□□□ 0.51
HIST1H3AP68431 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H3AP68431 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST1H3AP68431 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4L2-201ENST00000561772 1275 ntBASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4L6-201ENST00000626483 1275 ntBASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4L1-201ENST00000627662 1275 ntBASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4L8-201ENST00000629013 1275 ntBASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4L3-201ENST00000630187 1275 ntBASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4L7-201ENST00000630678 1275 ntBASIC18.22■□□□□ 0.51
HIST1H3AP68431 DUX4L5-201ENST00000630834 1275 ntBASIC18.22■□□□□ 0.51
HIST1H3AP68431 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST1H3AP68431 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST1H3AP68431 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST1H3AP68431 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HIST1H3AP68431 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H3AP68431 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms