Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.13■□□□□ 0.33
VAMP2P63027 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.13■□□□□ 0.33
VAMP2P63027 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.13■□□□□ 0.33
VAMP2P63027 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VAMP2P63027 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
VAMP2P63027 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAMP2P63027 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
VAMP2P63027 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VAMP2P63027 AL391422.3-201ENST00000603791 2761 ntBASIC17.12■□□□□ 0.33
VAMP2P63027 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.12■□□□□ 0.33
VAMP2P63027 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.12■□□□□ 0.33
VAMP2P63027 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.12■□□□□ 0.33
VAMP2P63027 AL499627.2-201ENST00000606283 725 ntBASIC17.12■□□□□ 0.33
VAMP2P63027 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.12■□□□□ 0.33
VAMP2P63027 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.12■□□□□ 0.33
VAMP2P63027 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAMP2P63027 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.12■□□□□ 0.33
VAMP2P63027 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VAMP2P63027 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.11■□□□□ 0.33
VAMP2P63027 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.11■□□□□ 0.33
VAMP2P63027 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.11■□□□□ 0.33
VAMP2P63027 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 AC006128.1-201ENST00000624704 1661 ntBASIC17.11■□□□□ 0.33
VAMP2P63027 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.11■□□□□ 0.33
VAMP2P63027 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VAMP2P63027 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.11■□□□□ 0.33
VAMP2P63027 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.11■□□□□ 0.33
VAMP2P63027 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.11■□□□□ 0.33
VAMP2P63027 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
VAMP2P63027 AL031602.1-201ENST00000633169 911 ntBASIC17.11■□□□□ 0.33
VAMP2P63027 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 AP005212.1-201ENST00000581547 1997 ntBASIC17.11■□□□□ 0.33
VAMP2P63027 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAMP2P63027 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
VAMP2P63027 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.1■□□□□ 0.33
VAMP2P63027 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VAMP2P63027 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
VAMP2P63027 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.1■□□□□ 0.33
VAMP2P63027 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VAMP2P63027 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 ATP5G2P3-201ENST00000429083 425 ntBASIC17.1■□□□□ 0.33
VAMP2P63027 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.1■□□□□ 0.33
VAMP2P63027 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VAMP2P63027 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VAMP2P63027 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAMP2P63027 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VAMP2P63027 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAMP2P63027 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VAMP2P63027 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAMP2P63027 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VAMP2P63027 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VAMP2P63027 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VAMP2P63027 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAMP2P63027 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms