Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 AL034346.1-201ENST00000568244 1277 ntBASIC23.8■■□□□ 1.4
CHMP4BP1P59074 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP4BP1P59074 C11orf96-202ENST00000528572 1834 ntBASIC23.8■■□□□ 1.4
CHMP4BP1P59074 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.79■■□□□ 1.4
CHMP4BP1P59074 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.79■■□□□ 1.4
CHMP4BP1P59074 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.79■■□□□ 1.4
CHMP4BP1P59074 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.79■■□□□ 1.4
CHMP4BP1P59074 KRT18P6-201ENST00000555540 1265 ntBASIC23.79■■□□□ 1.4
CHMP4BP1P59074 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CHMP4BP1P59074 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP4BP1P59074 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP4BP1P59074 AP006587.3-201ENST00000525742 1516 ntBASIC23.79■■□□□ 1.4
CHMP4BP1P59074 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BP1P59074 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BP1P59074 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.77■■□□□ 1.4
CHMP4BP1P59074 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CHMP4BP1P59074 AC098934.4-201ENST00000564127 592 ntBASIC23.77■■□□□ 1.4
CHMP4BP1P59074 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BP1P59074 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 AC139530.1-201ENST00000575312 1977 ntBASIC23.76■■□□□ 1.39
CHMP4BP1P59074 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 AC092053.2-201ENST00000640557 1818 ntBASIC23.76■■□□□ 1.39
CHMP4BP1P59074 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 KRT18P20-201ENST00000548986 1279 ntBASIC23.76■■□□□ 1.39
CHMP4BP1P59074 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.76■■□□□ 1.39
CHMP4BP1P59074 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 MIR4651-201ENST00000582622 73 ntBASIC23.75■■□□□ 1.39
CHMP4BP1P59074 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BP1P59074 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 TERF1P5-201ENST00000477545 1207 ntBASIC23.74■■□□□ 1.39
CHMP4BP1P59074 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.74■■□□□ 1.39
CHMP4BP1P59074 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.73■■□□□ 1.39
CHMP4BP1P59074 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHMP4BP1P59074 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHMP4BP1P59074 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms