Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.7■□□□□ 0.74
NR1H2P55055 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NR1H2P55055 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.7■□□□□ 0.74
NR1H2P55055 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H2P55055 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NR1H2P55055 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.69■□□□□ 0.74
NR1H2P55055 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NR1H2P55055 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NR1H2P55055 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.69■□□□□ 0.74
NR1H2P55055 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.69■□□□□ 0.74
NR1H2P55055 AC099791.2-201ENST00000605725 427 ntBASIC19.69■□□□□ 0.74
NR1H2P55055 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 AP005212.1-201ENST00000581547 1997 ntBASIC19.69■□□□□ 0.74
NR1H2P55055 OXCT2P1-201ENST00000447263 1535 ntBASIC19.69■□□□□ 0.74
NR1H2P55055 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NR1H2P55055 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NR1H2P55055 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H2P55055 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NR1H2P55055 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.68■□□□□ 0.74
NR1H2P55055 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NR1H2P55055 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.68■□□□□ 0.74
NR1H2P55055 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 AC091305.1-201ENST00000479476 895 ntBASIC19.68■□□□□ 0.74
NR1H2P55055 AC011298.3-201ENST00000615796 283 ntBASIC19.68■□□□□ 0.74
NR1H2P55055 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.68■□□□□ 0.74
NR1H2P55055 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H2P55055 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.67■□□□□ 0.74
NR1H2P55055 AF213884.3-201ENST00000563833 479 ntBASIC19.67■□□□□ 0.74
NR1H2P55055 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.67■□□□□ 0.74
NR1H2P55055 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.67■□□□□ 0.74
NR1H2P55055 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
NR1H2P55055 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NR1H2P55055 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.67■□□□□ 0.74
NR1H2P55055 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.67■□□□□ 0.74
NR1H2P55055 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NR1H2P55055 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H2P55055 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.67■□□□□ 0.74
NR1H2P55055 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NR1H2P55055 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NR1H2P55055 C17orf82-201ENST00000623772 1530 ntBASIC19.66■□□□□ 0.74
NR1H2P55055 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H2P55055 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H2P55055 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H2P55055 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.66■□□□□ 0.74
NR1H2P55055 SERBP1P1-201ENST00000396021 1160 ntBASIC19.66■□□□□ 0.74
NR1H2P55055 MIR939-201ENST00000401314 82 ntBASIC19.66■□□□□ 0.74
NR1H2P55055 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H2P55055 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.66■□□□□ 0.74
NR1H2P55055 MIR4767-201ENST00000582827 78 ntBASIC19.66■□□□□ 0.74
NR1H2P55055 AC092666.2-201ENST00000613287 246 ntBASIC19.66■□□□□ 0.74
NR1H2P55055 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H2P55055 PCDHAC2-203ENST00000615316 3011 ntBASIC19.66■□□□□ 0.74
NR1H2P55055 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.66■□□□□ 0.74
NR1H2P55055 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NR1H2P55055 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H2P55055 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H2P55055 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NR1H2P55055 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NR1H2P55055 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
NR1H2P55055 AC018445.3-201ENST00000624177 1945 ntBASIC19.65■□□□□ 0.74
NR1H2P55055 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H2P55055 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H2P55055 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NR1H2P55055 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H2P55055 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.65■□□□□ 0.74
NR1H2P55055 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.65■□□□□ 0.74
NR1H2P55055 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.65■□□□□ 0.74
NR1H2P55055 AP001330.3-201ENST00000520123 633 ntBASIC19.65■□□□□ 0.74
NR1H2P55055 RARRES2P6-201ENST00000567333 442 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms