Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.91■■□□□ 1.1
EPHB3P54753 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EPHB3P54753 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.91■■□□□ 1.1
EPHB3P54753 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
EPHB3P54753 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
EPHB3P54753 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
EPHB3P54753 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.91■■□□□ 1.1
EPHB3P54753 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.91■■□□□ 1.1
EPHB3P54753 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
EPHB3P54753 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.91■■□□□ 1.1
EPHB3P54753 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHB3P54753 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
EPHB3P54753 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
EPHB3P54753 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.9■■□□□ 1.1
EPHB3P54753 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.9■■□□□ 1.1
EPHB3P54753 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
EPHB3P54753 LSM12P1-201ENST00000411836 588 ntBASIC21.9■■□□□ 1.1
EPHB3P54753 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.9■■□□□ 1.1
EPHB3P54753 AC091874.3-201ENST00000512672 1195 ntBASIC21.9■■□□□ 1.1
EPHB3P54753 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.9■■□□□ 1.1
EPHB3P54753 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHB3P54753 MYC-209ENST00000641252 345 ntBASIC21.9■■□□□ 1.1
EPHB3P54753 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EPHB3P54753 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHB3P54753 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHB3P54753 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.89■■□□□ 1.09
EPHB3P54753 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.89■■□□□ 1.09
EPHB3P54753 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.89■■□□□ 1.09
EPHB3P54753 DUSP5P2-201ENST00000426873 1033 ntBASIC21.89■■□□□ 1.09
EPHB3P54753 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.89■■□□□ 1.09
EPHB3P54753 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.89■■□□□ 1.09
EPHB3P54753 AC083880.1-201ENST00000608266 535 ntBASIC21.89■■□□□ 1.09
EPHB3P54753 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
EPHB3P54753 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.89■■□□□ 1.09
EPHB3P54753 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
EPHB3P54753 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHB3P54753 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHB3P54753 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHB3P54753 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHB3P54753 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
EPHB3P54753 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHB3P54753 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.88■■□□□ 1.09
EPHB3P54753 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
EPHB3P54753 POU5F1P3-201ENST00000428824 1078 ntBASIC21.88■■□□□ 1.09
EPHB3P54753 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.88■■□□□ 1.09
EPHB3P54753 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHB3P54753 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHB3P54753 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
EPHB3P54753 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHB3P54753 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
EPHB3P54753 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.88■■□□□ 1.09
EPHB3P54753 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
EPHB3P54753 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.87■■□□□ 1.09
EPHB3P54753 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
EPHB3P54753 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.87■■□□□ 1.09
EPHB3P54753 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.87■■□□□ 1.09
EPHB3P54753 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
EPHB3P54753 AC100791.3-201ENST00000617619 330 ntBASIC21.87■■□□□ 1.09
EPHB3P54753 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
EPHB3P54753 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHB3P54753 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.87■■□□□ 1.09
EPHB3P54753 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.86■■□□□ 1.09
EPHB3P54753 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
EPHB3P54753 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.86■■□□□ 1.09
EPHB3P54753 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.86■■□□□ 1.09
EPHB3P54753 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.86■■□□□ 1.09
EPHB3P54753 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EPHB3P54753 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EPHB3P54753 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.85■■□□□ 1.09
EPHB3P54753 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.85■■□□□ 1.09
EPHB3P54753 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.85■■□□□ 1.09
EPHB3P54753 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
EPHB3P54753 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EPHB3P54753 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.85■■□□□ 1.09
EPHB3P54753 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EPHB3P54753 AL355472.2-201ENST00000422958 438 ntBASIC21.85■■□□□ 1.09
EPHB3P54753 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EPHB3P54753 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.85■■□□□ 1.09
EPHB3P54753 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EPHB3P54753 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms