Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.68■□□□□ 0.9
CLNS1AP54105 AL451085.2-201ENST00000605085 799 ntBASIC20.68■□□□□ 0.9
CLNS1AP54105 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.68■□□□□ 0.9
CLNS1AP54105 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.68■□□□□ 0.9
CLNS1AP54105 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLNS1AP54105 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.67■□□□□ 0.9
CLNS1AP54105 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 AC244015.2-201ENST00000616358 1861 ntBASIC20.67■□□□□ 0.9
CLNS1AP54105 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 UNC93B8-201ENST00000511903 705 ntBASIC20.67■□□□□ 0.9
CLNS1AP54105 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.67■□□□□ 0.9
CLNS1AP54105 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLNS1AP54105 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLNS1AP54105 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLNS1AP54105 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.66■□□□□ 0.9
CLNS1AP54105 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLNS1AP54105 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
CLNS1AP54105 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CLNS1AP54105 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.66■□□□□ 0.9
CLNS1AP54105 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.66■□□□□ 0.9
CLNS1AP54105 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLNS1AP54105 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.66■□□□□ 0.9
CLNS1AP54105 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLNS1AP54105 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLNS1AP54105 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLNS1AP54105 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.65■□□□□ 0.9
CLNS1AP54105 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLNS1AP54105 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.65■□□□□ 0.9
CLNS1AP54105 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.65■□□□□ 0.9
CLNS1AP54105 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.65■□□□□ 0.9
CLNS1AP54105 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.65■□□□□ 0.9
CLNS1AP54105 AL031602.1-201ENST00000633169 911 ntBASIC20.65■□□□□ 0.9
CLNS1AP54105 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CLNS1AP54105 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLNS1AP54105 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLNS1AP54105 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLNS1AP54105 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLNS1AP54105 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLNS1AP54105 AC133637.1-201ENST00000624115 1537 ntBASIC20.64■□□□□ 0.9
CLNS1AP54105 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLNS1AP54105 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.64■□□□□ 0.89
CLNS1AP54105 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLNS1AP54105 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLNS1AP54105 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.64■□□□□ 0.89
CLNS1AP54105 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.64■□□□□ 0.89
CLNS1AP54105 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.64■□□□□ 0.89
CLNS1AP54105 FEM1AP1-201ENST00000431297 1995 ntBASIC20.64■□□□□ 0.89
CLNS1AP54105 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.64■□□□□ 0.89
CLNS1AP54105 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLNS1AP54105 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLNS1AP54105 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
CLNS1AP54105 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CLNS1AP54105 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.63■□□□□ 0.89
CLNS1AP54105 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLNS1AP54105 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLNS1AP54105 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.63■□□□□ 0.89
CLNS1AP54105 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLNS1AP54105 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms