Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
CLTCL1P53675 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC30.22■■■□□ 2.43
CLTCL1P53675 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.22■■■□□ 2.43
CLTCL1P53675 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CLTCL1P53675 GATS-209ENST00000454084 1030 ntTSL 3 BASIC30.22■■■□□ 2.43
CLTCL1P53675 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC30.22■■■□□ 2.43
CLTCL1P53675 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CLTCL1P53675 STX5-203ENST00000394690 1568 ntTSL 5 BASIC30.22■■■□□ 2.43
CLTCL1P53675 AC007322.3-201ENST00000426526 701 ntBASIC30.22■■■□□ 2.43
CLTCL1P53675 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CLTCL1P53675 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.22■■■□□ 2.43
CLTCL1P53675 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CLTCL1P53675 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CLTCL1P53675 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CLTCL1P53675 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CLTCL1P53675 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CLTCL1P53675 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CLTCL1P53675 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC30.21■■■□□ 2.43
CLTCL1P53675 AC026366.1-201ENST00000488803 879 ntBASIC30.21■■■□□ 2.43
CLTCL1P53675 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.21■■■□□ 2.43
CLTCL1P53675 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CLTCL1P53675 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC30.2■■■□□ 2.43
CLTCL1P53675 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CLTCL1P53675 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CLTCL1P53675 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CLTCL1P53675 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CLTCL1P53675 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC30.2■■■□□ 2.43
CLTCL1P53675 VMO1-204ENST00000441199 741 ntTSL 2 BASIC30.2■■■□□ 2.43
CLTCL1P53675 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
CLTCL1P53675 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CLTCL1P53675 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CLTCL1P53675 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC30.19■■■□□ 2.42
CLTCL1P53675 LSM12P1-201ENST00000411836 588 ntBASIC30.19■■■□□ 2.42
CLTCL1P53675 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC30.19■■■□□ 2.42
CLTCL1P53675 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CLTCL1P53675 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CLTCL1P53675 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CLTCL1P53675 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
CLTCL1P53675 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CLTCL1P53675 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC30.18■■■□□ 2.42
CLTCL1P53675 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC30.18■■■□□ 2.42
CLTCL1P53675 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC30.18■■■□□ 2.42
CLTCL1P53675 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 SAPCD2P1-201ENST00000395413 1184 ntBASIC30.18■■■□□ 2.42
CLTCL1P53675 NME6-213ENST00000451657 871 ntTSL 2 BASIC30.18■■■□□ 2.42
CLTCL1P53675 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.18■■■□□ 2.42
CLTCL1P53675 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.18■■■□□ 2.42
CLTCL1P53675 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CLTCL1P53675 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CLTCL1P53675 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CLTCL1P53675 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC30.17■■■□□ 2.42
CLTCL1P53675 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CLTCL1P53675 MCRIP2P1-201ENST00000394346 511 ntBASIC30.17■■■□□ 2.42
CLTCL1P53675 CDV3P1-201ENST00000471403 739 ntBASIC30.17■■■□□ 2.42
CLTCL1P53675 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
CLTCL1P53675 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
CLTCL1P53675 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.17■■■□□ 2.42
CLTCL1P53675 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CLTCL1P53675 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
CLTCL1P53675 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC30.16■■■□□ 2.42
CLTCL1P53675 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC30.16■■■□□ 2.42
CLTCL1P53675 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
CLTCL1P53675 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CLTCL1P53675 AC128676.1-201ENST00000454392 318 ntBASIC30.16■■■□□ 2.42
CLTCL1P53675 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
CLTCL1P53675 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CLTCL1P53675 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC30.15■■■□□ 2.42
CLTCL1P53675 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC30.15■■■□□ 2.42
CLTCL1P53675 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC30.15■■■□□ 2.42
CLTCL1P53675 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.15■■■□□ 2.42
CLTCL1P53675 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC30.15■■■□□ 2.42
CLTCL1P53675 KLF2-202ENST00000592003 564 ntTSL 3 BASIC30.15■■■□□ 2.42
CLTCL1P53675 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CLTCL1P53675 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC30.15■■■□□ 2.42
CLTCL1P53675 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CLTCL1P53675 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
CLTCL1P53675 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLTCL1P53675 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLTCL1P53675 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
CLTCL1P53675 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC30.14■■■□□ 2.42
CLTCL1P53675 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.14■■■□□ 2.42
CLTCL1P53675 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLTCL1P53675 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLTCL1P53675 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC30.14■■■□□ 2.42
CLTCL1P53675 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLTCL1P53675 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLTCL1P53675 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
CLTCL1P53675 AC105020.6-201ENST00000621523 1217 ntBASIC30.14■■■□□ 2.41
CLTCL1P53675 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.41
CLTCL1P53675 AC073648.6-201ENST00000641589 218 ntBASIC30.14■■■□□ 2.41
CLTCL1P53675 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms