Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LIMK2P53671 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.07■□□□□ 0.96
LIMK2P53671 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LIMK2P53671 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LIMK2P53671 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.06■□□□□ 0.96
LIMK2P53671 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LIMK2P53671 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LIMK2P53671 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LIMK2P53671 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.06■□□□□ 0.96
LIMK2P53671 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK2P53671 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK2P53671 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK2P53671 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LIMK2P53671 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK2P53671 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LIMK2P53671 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK2P53671 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK2P53671 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.05■□□□□ 0.96
LIMK2P53671 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK2P53671 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK2P53671 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK2P53671 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.05■□□□□ 0.96
LIMK2P53671 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.05■□□□□ 0.96
LIMK2P53671 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.05■□□□□ 0.96
LIMK2P53671 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK2P53671 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LIMK2P53671 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
LIMK2P53671 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK2P53671 AL157384.1-201ENST00000445995 2473 ntBASIC21.04■□□□□ 0.96
LIMK2P53671 BX005040.4-201ENST00000637145 1518 ntBASIC21.04■□□□□ 0.96
LIMK2P53671 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK2P53671 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LIMK2P53671 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK2P53671 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.04■□□□□ 0.96
LIMK2P53671 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.04■□□□□ 0.96
LIMK2P53671 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LIMK2P53671 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK2P53671 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.04■□□□□ 0.96
LIMK2P53671 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.04■□□□□ 0.96
LIMK2P53671 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.04■□□□□ 0.96
LIMK2P53671 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
LIMK2P53671 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK2P53671 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK2P53671 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.03■□□□□ 0.96
LIMK2P53671 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
LIMK2P53671 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIMK2P53671 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.03■□□□□ 0.96
LIMK2P53671 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LIMK2P53671 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
LIMK2P53671 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIMK2P53671 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
LIMK2P53671 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.03■□□□□ 0.96
LIMK2P53671 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.03■□□□□ 0.96
LIMK2P53671 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LIMK2P53671 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.03■□□□□ 0.96
LIMK2P53671 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
LIMK2P53671 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.03■□□□□ 0.96
LIMK2P53671 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.03■□□□□ 0.96
LIMK2P53671 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.03■□□□□ 0.96
LIMK2P53671 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LIMK2P53671 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LIMK2P53671 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIMK2P53671 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
LIMK2P53671 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.02■□□□□ 0.96
LIMK2P53671 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.02■□□□□ 0.96
LIMK2P53671 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.02■□□□□ 0.96
LIMK2P53671 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.02■□□□□ 0.96
LIMK2P53671 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.02■□□□□ 0.96
LIMK2P53671 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.02■□□□□ 0.96
LIMK2P53671 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.02■□□□□ 0.96
LIMK2P53671 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms