Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCNKAP51800 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCNKAP51800 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCNKAP51800 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCNKAP51800 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCNKAP51800 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCNKAP51800 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLCNKAP51800 RBM17P2-201ENST00000616397 1405 ntBASIC20.53■□□□□ 0.88
CLCNKAP51800 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLCNKAP51800 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCNKAP51800 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLCNKAP51800 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 MIR663A-201ENST00000385250 93 ntBASIC20.52■□□□□ 0.88
CLCNKAP51800 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCNKAP51800 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCNKAP51800 AC005181.1-201ENST00000604782 1256 ntBASIC20.52■□□□□ 0.88
CLCNKAP51800 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.52■□□□□ 0.88
CLCNKAP51800 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCNKAP51800 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCNKAP51800 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCNKAP51800 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLCNKAP51800 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.52■□□□□ 0.87
CLCNKAP51800 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLCNKAP51800 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLCNKAP51800 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CLCNKAP51800 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLCNKAP51800 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCNKAP51800 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.51■□□□□ 0.87
CLCNKAP51800 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCNKAP51800 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCNKAP51800 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCNKAP51800 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.51■□□□□ 0.87
CLCNKAP51800 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCNKAP51800 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCNKAP51800 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLCNKAP51800 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCNKAP51800 AL162412.1-201ENST00000567129 965 ntBASIC20.5■□□□□ 0.87
CLCNKAP51800 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CLCNKAP51800 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.5■□□□□ 0.87
CLCNKAP51800 AL050303.2-201ENST00000619798 666 ntBASIC20.5■□□□□ 0.87
CLCNKAP51800 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLCNKAP51800 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCNKAP51800 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCNKAP51800 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.49■□□□□ 0.87
CLCNKAP51800 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCNKAP51800 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.49■□□□□ 0.87
CLCNKAP51800 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 AC068338.2-201ENST00000563278 1430 ntBASIC20.49■□□□□ 0.87
CLCNKAP51800 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCNKAP51800 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCNKAP51800 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.48■□□□□ 0.87
CLCNKAP51800 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
CLCNKAP51800 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
CLCNKAP51800 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLCNKAP51800 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCNKAP51800 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCNKAP51800 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCNKAP51800 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCNKAP51800 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCNKAP51800 AC133552.2-202ENST00000575694 574 ntBASIC20.48■□□□□ 0.87
CLCNKAP51800 AL121832.2-201ENST00000610979 668 ntBASIC20.48■□□□□ 0.87
CLCNKAP51800 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCNKAP51800 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCNKAP51800 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CLCNKAP51800 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCNKAP51800 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.47■□□□□ 0.87
CLCNKAP51800 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms