Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN2P51788 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN2P51788 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.17■□□□□ 0.82
CLCN2P51788 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCN2P51788 SMUG1P1-201ENST00000590640 811 ntBASIC20.17■□□□□ 0.82
CLCN2P51788 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.17■□□□□ 0.82
CLCN2P51788 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLCN2P51788 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN2P51788 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN2P51788 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN2P51788 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN2P51788 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN2P51788 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLCN2P51788 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN2P51788 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN2P51788 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLCN2P51788 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CLCN2P51788 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN2P51788 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN2P51788 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLCN2P51788 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CLCN2P51788 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN2P51788 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN2P51788 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 AC079089.2-201ENST00000531211 1277 ntBASIC20.15■□□□□ 0.82
CLCN2P51788 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN2P51788 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN2P51788 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLCN2P51788 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLCN2P51788 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLCN2P51788 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN2P51788 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN2P51788 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN2P51788 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CLCN2P51788 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN2P51788 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN2P51788 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLCN2P51788 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN2P51788 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN2P51788 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN2P51788 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLCN2P51788 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN2P51788 BX005040.4-201ENST00000637145 1518 ntBASIC20.14■□□□□ 0.81
CLCN2P51788 LINC02228-203ENST00000641970 1355 ntBASIC20.14■□□□□ 0.81
CLCN2P51788 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CLCN2P51788 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLCN2P51788 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLCN2P51788 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.14■□□□□ 0.81
CLCN2P51788 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN2P51788 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CLCN2P51788 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN2P51788 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.14■□□□□ 0.81
CLCN2P51788 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN2P51788 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN2P51788 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLCN2P51788 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN2P51788 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN2P51788 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLCN2P51788 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN2P51788 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN2P51788 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN2P51788 AC034268.1-201ENST00000441047 882 ntBASIC20.13■□□□□ 0.81
CLCN2P51788 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN2P51788 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN2P51788 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN2P51788 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN2P51788 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CLCN2P51788 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN2P51788 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN2P51788 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLCN2P51788 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.12■□□□□ 0.81
CLCN2P51788 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN2P51788 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN2P51788 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN2P51788 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLCN2P51788 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.12■□□□□ 0.81
CLCN2P51788 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.12■□□□□ 0.81
CLCN2P51788 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCN2P51788 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN2P51788 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCN2P51788 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN2P51788 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CLCN2P51788 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms