Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR4P51571 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR4P51571 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR4P51571 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR4P51571 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR4P51571 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR4P51571 SLC29A4P1-201ENST00000398760 971 ntBASIC19.22■□□□□ 0.67
SSR4P51571 AL355802.2-201ENST00000402069 882 ntBASIC19.22■□□□□ 0.67
SSR4P51571 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR4P51571 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.22■□□□□ 0.67
SSR4P51571 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.22■□□□□ 0.67
SSR4P51571 AC105036.2-201ENST00000569468 176 ntBASIC19.22■□□□□ 0.67
SSR4P51571 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SSR4P51571 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR4P51571 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR4P51571 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR4P51571 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SSR4P51571 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR4P51571 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR4P51571 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SSR4P51571 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SSR4P51571 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SSR4P51571 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR4P51571 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR4P51571 AL162412.1-201ENST00000567129 965 ntBASIC19.21■□□□□ 0.67
SSR4P51571 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR4P51571 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR4P51571 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR4P51571 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SSR4P51571 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 TSPY6P-201ENST00000448518 926 ntBASIC19.2■□□□□ 0.66
SSR4P51571 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.2■□□□□ 0.66
SSR4P51571 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR4P51571 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.2■□□□□ 0.66
SSR4P51571 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 OR10C1-204ENST00000622521 1039 ntBASIC19.2■□□□□ 0.66
SSR4P51571 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.2■□□□□ 0.66
SSR4P51571 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR4P51571 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR4P51571 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SSR4P51571 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SSR4P51571 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.19■□□□□ 0.66
SSR4P51571 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR4P51571 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR4P51571 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.19■□□□□ 0.66
SSR4P51571 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SSR4P51571 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SSR4P51571 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR4P51571 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR4P51571 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
SSR4P51571 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.18■□□□□ 0.66
SSR4P51571 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR4P51571 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR4P51571 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR4P51571 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR4P51571 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.18■□□□□ 0.66
SSR4P51571 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.18■□□□□ 0.66
SSR4P51571 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SSR4P51571 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SSR4P51571 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR4P51571 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.18■□□□□ 0.66
SSR4P51571 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR4P51571 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR4P51571 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.18■□□□□ 0.66
SSR4P51571 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SSR4P51571 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSR4P51571 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSR4P51571 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR4P51571 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SSR4P51571 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.17■□□□□ 0.66
SSR4P51571 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR4P51571 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSR4P51571 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSR4P51571 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms