Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1EP49674 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1EP49674 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CSNK1EP49674 UNC93B4-201ENST00000505679 747 ntBASIC20.58■□□□□ 0.89
CSNK1EP49674 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1EP49674 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CSNK1EP49674 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1EP49674 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1EP49674 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CSNK1EP49674 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 AL596275.1-201ENST00000423464 877 ntBASIC20.57■□□□□ 0.88
CSNK1EP49674 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1EP49674 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.57■□□□□ 0.88
CSNK1EP49674 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1EP49674 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CSNK1EP49674 AC100791.3-201ENST00000617619 330 ntBASIC20.57■□□□□ 0.88
CSNK1EP49674 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
CSNK1EP49674 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CSNK1EP49674 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1EP49674 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1EP49674 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CSNK1EP49674 AC080038.3-201ENST00000623346 1952 ntBASIC20.56■□□□□ 0.88
CSNK1EP49674 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1EP49674 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1EP49674 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.56■□□□□ 0.88
CSNK1EP49674 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1EP49674 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1EP49674 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1EP49674 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1EP49674 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1EP49674 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CSNK1EP49674 AC010542.4-201ENST00000563151 1910 ntBASIC20.55■□□□□ 0.88
CSNK1EP49674 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1EP49674 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
CSNK1EP49674 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.55■□□□□ 0.88
CSNK1EP49674 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.55■□□□□ 0.88
CSNK1EP49674 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1EP49674 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1EP49674 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.55■□□□□ 0.88
CSNK1EP49674 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1EP49674 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CSNK1EP49674 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CSNK1EP49674 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.55■□□□□ 0.88
CSNK1EP49674 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CSNK1EP49674 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.54■□□□□ 0.88
CSNK1EP49674 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.54■□□□□ 0.88
CSNK1EP49674 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.54■□□□□ 0.88
CSNK1EP49674 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.54■□□□□ 0.88
CSNK1EP49674 AC060766.5-201ENST00000590539 871 ntBASIC20.54■□□□□ 0.88
CSNK1EP49674 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CSNK1EP49674 AC008403.3-201ENST00000598924 454 ntBASIC20.54■□□□□ 0.88
CSNK1EP49674 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CSNK1EP49674 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.54■□□□□ 0.88
CSNK1EP49674 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1EP49674 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CSNK1EP49674 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1EP49674 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CSNK1EP49674 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CSNK1EP49674 MCRIP2P1-201ENST00000394346 511 ntBASIC20.53■□□□□ 0.88
CSNK1EP49674 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1EP49674 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1EP49674 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 AL589743.5-201ENST00000616611 1050 ntBASIC20.53■□□□□ 0.88
CSNK1EP49674 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CSNK1EP49674 HLA-B-256ENST00000639848 1089 ntBASIC20.53■□□□□ 0.88
CSNK1EP49674 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1EP49674 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1EP49674 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1EP49674 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1EP49674 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1EP49674 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1EP49674 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1EP49674 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1EP49674 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1EP49674 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.52■□□□□ 0.88
CSNK1EP49674 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1EP49674 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.52■□□□□ 0.88
CSNK1EP49674 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CSNK1EP49674 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms