Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SLC6A12P48065 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A12P48065 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC6A12P48065 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC6A12P48065 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A12P48065 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC6A12P48065 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC6A12P48065 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC6A12P48065 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A12P48065 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC6A12P48065 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLC6A12P48065 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A12P48065 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A12P48065 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A12P48065 PLK5-205ENST00000642079 1969 ntBASIC20.19■□□□□ 0.82
SLC6A12P48065 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC6A12P48065 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SLC6A12P48065 AC097381.1-201ENST00000429019 1296 ntBASIC20.19■□□□□ 0.82
SLC6A12P48065 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC6A12P48065 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A12P48065 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLC6A12P48065 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A12P48065 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A12P48065 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A12P48065 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.19■□□□□ 0.82
SLC6A12P48065 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A12P48065 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SLC6A12P48065 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SLC6A12P48065 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLC6A12P48065 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A12P48065 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A12P48065 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC6A12P48065 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A12P48065 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A12P48065 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A12P48065 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SLC6A12P48065 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 SLC7A5P2-201ENST00000553010 536 ntBASIC20.17■□□□□ 0.82
SLC6A12P48065 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC6A12P48065 MIR6821-201ENST00000617625 74 ntBASIC20.17■□□□□ 0.82
SLC6A12P48065 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A12P48065 RARRES2P11-201ENST00000635158 484 ntBASIC20.17■□□□□ 0.82
SLC6A12P48065 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLC6A12P48065 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SLC6A12P48065 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A12P48065 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC6A12P48065 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SLC6A12P48065 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A12P48065 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 AC006128.1-201ENST00000624704 1661 ntBASIC20.16■□□□□ 0.82
SLC6A12P48065 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 AC121338.2-201ENST00000622535 1744 ntBASIC20.16■□□□□ 0.82
SLC6A12P48065 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC6A12P48065 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.16■□□□□ 0.82
SLC6A12P48065 KRT18P20-201ENST00000548986 1279 ntBASIC20.16■□□□□ 0.82
SLC6A12P48065 AC120498.10-201ENST00000621827 505 ntBASIC20.16■□□□□ 0.82
SLC6A12P48065 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLC6A12P48065 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC6A12P48065 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A12P48065 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A12P48065 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A12P48065 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A12P48065 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A12P48065 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
SLC6A12P48065 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SLC6A12P48065 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC6A12P48065 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A12P48065 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms