Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 SLN1YIL147C 3663 nt2□□□□□ -2.09
LSM1P47017 NUP170YBL079W 4509 nt2□□□□□ -2.09
LSM1P47017 KAP123YER110C 3342 nt1.99□□□□□ -2.09
LSM1P47017 RRP12YPL012W 3687 nt1.99□□□□□ -2.09
LSM1P47017 TOR2YKL203C 7425 nt1.99□□□□□ -2.09
LSM1P47017 YDR133CYDR133C 336 nt1.99□□□□□ -2.09
LSM1P47017 YGR064WYGR064W 369 nt1.99□□□□□ -2.09
LSM1P47017 VMA10YHR039C-A 345 nt1.99□□□□□ -2.09
LSM1P47017 RPC17YJL011C 486 nt1.99□□□□□ -2.09
LSM1P47017 YJL202CYJL202C 348 nt1.99□□□□□ -2.09
LSM1P47017 EMC6YLL014W 327 nt1.99□□□□□ -2.09
LSM1P47017 YLR290CYLR290C 834 nt1.99□□□□□ -2.09
LSM1P47017 YOR331CYOR331C 558 nt1.99□□□□□ -2.09
LSM1P47017 PIN3YPR154W 648 nt1.99□□□□□ -2.09
LSM1P47017 AIM4YBR194W 372 nt1.99□□□□□ -2.09
LSM1P47017 PSP1YDR505C 2526 nt1.99□□□□□ -2.09
LSM1P47017 HRD3YLR207W 2502 nt1.99□□□□□ -2.09
LSM1P47017 GPI14YJR013W 1212 nt1.98□□□□□ -2.09
LSM1P47017 REX3YLR107W 1215 nt1.98□□□□□ -2.09
LSM1P47017 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
LSM1P47017 LTP1YPR073C 486 nt1.98□□□□□ -2.09
LSM1P47017 ALY1YKR021W 2748 nt1.98□□□□□ -2.09
LSM1P47017 DBF20YPR111W 1695 nt1.98□□□□□ -2.09
LSM1P47017 INO80YGL150C 4470 nt1.98□□□□□ -2.09
LSM1P47017 UBR1YGR184C 5853 nt1.98□□□□□ -2.09
LSM1P47017 DSS1YMR287C 2910 nt1.97□□□□□ -2.09
LSM1P47017 tW(CCA)G1tW(CCA)G1 72 nt1.97□□□□□ -2.09
LSM1P47017 tW(CCA)G2tW(CCA)G2 72 nt1.97□□□□□ -2.09
LSM1P47017 tW(CCA)JtW(CCA)J 72 nt1.97□□□□□ -2.09
LSM1P47017 tW(CCA)KtW(CCA)K 72 nt1.97□□□□□ -2.09
LSM1P47017 tW(CCA)MtW(CCA)M 72 nt1.97□□□□□ -2.09
LSM1P47017 tW(CCA)PtW(CCA)P 72 nt1.97□□□□□ -2.09
LSM1P47017 YJL169WYJL169W 369 nt1.97□□□□□ -2.09
LSM1P47017 YAL031W-AYAL031W-A 309 nt1.97□□□□□ -2.09
LSM1P47017 YKR051WYKR051W 1257 nt1.97□□□□□ -2.09
LSM1P47017 ADI1YMR009W 540 nt1.97□□□□□ -2.09
LSM1P47017 ART10YLR392C 1557 nt1.97□□□□□ -2.09
LSM1P47017 YIL024CYIL024C 570 nt1.96□□□□□ -2.1
LSM1P47017 YJL052C-AYJL052C-A 120 nt1.96□□□□□ -2.1
LSM1P47017 YLR154W-AYLR154W-A 186 nt1.96□□□□□ -2.1
LSM1P47017 DGR1YNL130C-A 147 nt1.96□□□□□ -2.1
LSM1P47017 YPL276WYPL276W 438 nt1.96□□□□□ -2.1
LSM1P47017 SCH9YHR205W 2475 nt1.96□□□□□ -2.1
LSM1P47017 AGC1YPR021C 2709 nt1.96□□□□□ -2.1
LSM1P47017 SAP190YKR028W 3102 nt1.95□□□□□ -2.1
LSM1P47017 IST2YBR086C 2841 nt1.95□□□□□ -2.1
LSM1P47017 TFB1YDR311W 1929 nt1.95□□□□□ -2.1
LSM1P47017 YBL005W-AYBL005W-A 1323 nt1.95□□□□□ -2.1
LSM1P47017 YMR046CYMR046C 1323 nt1.95□□□□□ -2.1
LSM1P47017 GIP3YPL137C 3831 nt1.95□□□□□ -2.1
LSM1P47017 SCP160YJL080C 3669 nt1.95□□□□□ -2.1
LSM1P47017 YDL118WYDL118W 381 nt1.95□□□□□ -2.1
LSM1P47017 LIP2YLR239C 987 nt1.95□□□□□ -2.1
LSM1P47017 SSP2YOR242C 1116 nt1.95□□□□□ -2.1
LSM1P47017 NEO1YIL048W 3456 nt1.95□□□□□ -2.1
LSM1P47017 TFC3YAL001C 3483 nt1.95□□□□□ -2.1
LSM1P47017 BRE1YDL074C 2103 nt1.94□□□□□ -2.1
LSM1P47017 YCT1YLL055W 1596 nt1.94□□□□□ -2.1
LSM1P47017 MSL5YLR116W 1431 nt1.94□□□□□ -2.1
LSM1P47017 PIB1YDR313C 861 nt1.94□□□□□ -2.1
LSM1P47017 MPO1YGL010W 525 nt1.94□□□□□ -2.1
LSM1P47017 MRM2YGL136C 963 nt1.94□□□□□ -2.1
LSM1P47017 YGL138CYGL138C 1038 nt1.94□□□□□ -2.1
LSM1P47017 YGR190CYGR190C 366 nt1.94□□□□□ -2.1
LSM1P47017 VPH2YKL119C 648 nt1.94□□□□□ -2.1
LSM1P47017 ESF2YNR054C 951 nt1.94□□□□□ -2.1
LSM1P47017 YDR061WYDR061W 1620 nt1.94□□□□□ -2.1
LSM1P47017 YHL012WYHL012W 1482 nt1.94□□□□□ -2.1
LSM1P47017 APC5YOR249C 2058 nt1.94□□□□□ -2.1
LSM1P47017 ERT1YBR239C 1590 nt1.93□□□□□ -2.1
LSM1P47017 MPH1YIR002C 2982 nt1.93□□□□□ -2.1
LSM1P47017 BIT61YJL058C 1632 nt1.93□□□□□ -2.1
LSM1P47017 UBC13YDR092W 462 nt1.93□□□□□ -2.1
LSM1P47017 YER119C-AYER119C-A 372 nt1.93□□□□□ -2.1
LSM1P47017 YFH7YFR007W 1062 nt1.93□□□□□ -2.1
LSM1P47017 YGR114CYGR114C 390 nt1.93□□□□□ -2.1
LSM1P47017 RTS3YGR161C 792 nt1.93□□□□□ -2.1
LSM1P47017 ARC19YKL013C 516 nt1.93□□□□□ -2.1
LSM1P47017 YKL069WYKL069W 543 nt1.93□□□□□ -2.1
LSM1P47017 COA4YLR218C 453 nt1.93□□□□□ -2.1
LSM1P47017 SEC66YBR171W 621 nt1.93□□□□□ -2.1
LSM1P47017 KAR4YCL055W 1008 nt1.93□□□□□ -2.1
LSM1P47017 UTP5YDR398W 1932 nt1.93□□□□□ -2.1
LSM1P47017 RRG1YDR065W 1098 nt1.92□□□□□ -2.1
LSM1P47017 YDR193WYDR193W 399 nt1.92□□□□□ -2.1
LSM1P47017 YPS5YGL259W 498 nt1.92□□□□□ -2.1
LSM1P47017 SRL3YKR091W 741 nt1.92□□□□□ -2.1
LSM1P47017 YLL047WYLL047W 384 nt1.92□□□□□ -2.1
LSM1P47017 USB1YLR132C 873 nt1.92□□□□□ -2.1
LSM1P47017 MRPS17YMR188C 714 nt1.92□□□□□ -2.1
LSM1P47017 RTG3YBL103C 1461 nt1.92□□□□□ -2.1
LSM1P47017 CIR1YGR207C 786 nt1.91□□□□□ -2.1
LSM1P47017 MMF1YIL051C 438 nt1.91□□□□□ -2.1
LSM1P47017 MBB1YJL199C 327 nt1.91□□□□□ -2.1
LSM1P47017 PRM6YML047C 1059 nt1.91□□□□□ -2.1
LSM1P47017 YBL055CYBL055C 1257 nt1.91□□□□□ -2.1
LSM1P47017 APC2YLR127C 2562 nt1.91□□□□□ -2.1
LSM1P47017 DIS3YOL021C 3006 nt1.9□□□□□ -2.11
LSM1P47017 POM152YMR129W 4014 nt1.9□□□□□ -2.11
LSM1P47017 CTH1YDR151C 978 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms