Protein–RNA interactions for Protein: P46531

NOTCH1, Neurogenic locus notch homolog protein 1, humanhuman

Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1P46531 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NOTCH1P46531 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC15.7■□□□□ 0.1
NOTCH1P46531 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.7■□□□□ 0.1
NOTCH1P46531 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.7■□□□□ 0.1
NOTCH1P46531 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NOTCH1P46531 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NOTCH1P46531 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NOTCH1P46531 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.7■□□□□ 0.1
NOTCH1P46531 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NOTCH1P46531 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NOTCH1P46531 AL049597.2-201ENST00000565575 961 ntBASIC15.7■□□□□ 0.1
NOTCH1P46531 AC243732.1-201ENST00000612648 864 ntBASIC15.7■□□□□ 0.1
NOTCH1P46531 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.69■□□□□ 0.1
NOTCH1P46531 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.69■□□□□ 0.1
NOTCH1P46531 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 AC020928.2-201ENST00000588717 2197 ntBASIC15.69■□□□□ 0.1
NOTCH1P46531 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.69■□□□□ 0.1
NOTCH1P46531 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.69■□□□□ 0.1
NOTCH1P46531 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.69■□□□□ 0.1
NOTCH1P46531 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH1P46531 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.69■□□□□ 0.1
NOTCH1P46531 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 AC142381.3-201ENST00000568208 1670 ntBASIC15.68■□□□□ 0.1
NOTCH1P46531 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.68■□□□□ 0.1
NOTCH1P46531 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.68■□□□□ 0.1
NOTCH1P46531 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.68■□□□□ 0.1
NOTCH1P46531 RARRES2P10-201ENST00000564312 460 ntBASIC15.68■□□□□ 0.1
NOTCH1P46531 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.68■□□□□ 0.1
NOTCH1P46531 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 AC053503.5-201ENST00000601508 636 ntBASIC15.68■□□□□ 0.1
NOTCH1P46531 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH1P46531 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NOTCH1P46531 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NOTCH1P46531 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
NOTCH1P46531 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NOTCH1P46531 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.67■□□□□ 0.1
NOTCH1P46531 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.67■□□□□ 0.1
NOTCH1P46531 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.67■□□□□ 0.1
NOTCH1P46531 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.67■□□□□ 0.1
NOTCH1P46531 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.67■□□□□ 0.1
NOTCH1P46531 AC124016.1-201ENST00000609552 612 ntBASIC15.67■□□□□ 0.1
NOTCH1P46531 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NOTCH1P46531 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 AC145285.6-201ENST00000604632 637 ntBASIC15.67■□□□□ 0.1
NOTCH1P46531 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.67■□□□□ 0.1
NOTCH1P46531 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.67■□□□□ 0.1
NOTCH1P46531 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH1P46531 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH1P46531 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.66■□□□□ 0.1
NOTCH1P46531 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH1P46531 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.66■□□□□ 0.1
NOTCH1P46531 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH1P46531 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NOTCH1P46531 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH1P46531 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
NOTCH1P46531 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH1P46531 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH1P46531 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH1P46531 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH1P46531 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.66■□□□□ 0.1
NOTCH1P46531 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.66■□□□□ 0.1
NOTCH1P46531 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms