Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.31■□□□□ 0.68
ATRXP46100 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATRXP46100 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATRXP46100 AC004812.2-201ENST00000611079 2094 ntBASIC19.31■□□□□ 0.68
ATRXP46100 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATRXP46100 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATRXP46100 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATRXP46100 ABCB10P4-201ENST00000566803 2184 ntBASIC19.3■□□□□ 0.68
ATRXP46100 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATRXP46100 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.3■□□□□ 0.68
ATRXP46100 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ATRXP46100 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATRXP46100 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.3■□□□□ 0.68
ATRXP46100 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.3■□□□□ 0.68
ATRXP46100 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATRXP46100 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.3■□□□□ 0.68
ATRXP46100 AC145676.1-201ENST00000514988 2004 ntBASIC19.3■□□□□ 0.68
ATRXP46100 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATRXP46100 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATRXP46100 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.3■□□□□ 0.68
ATRXP46100 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATRXP46100 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ATRXP46100 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.29■□□□□ 0.68
ATRXP46100 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATRXP46100 DUX4L26-201ENST00000489078 1255 ntBASIC19.29■□□□□ 0.68
ATRXP46100 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.29■□□□□ 0.68
ATRXP46100 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATRXP46100 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATRXP46100 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.29■□□□□ 0.68
ATRXP46100 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATRXP46100 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATRXP46100 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATRXP46100 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATRXP46100 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.29■□□□□ 0.68
ATRXP46100 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ATRXP46100 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.29■□□□□ 0.68
ATRXP46100 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.29■□□□□ 0.68
ATRXP46100 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.29■□□□□ 0.68
ATRXP46100 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATRXP46100 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATRXP46100 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.29■□□□□ 0.68
ATRXP46100 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.28■□□□□ 0.68
ATRXP46100 LSM12P1-201ENST00000411836 588 ntBASIC19.28■□□□□ 0.68
ATRXP46100 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ATRXP46100 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.28■□□□□ 0.68
ATRXP46100 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.28■□□□□ 0.68
ATRXP46100 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.28■□□□□ 0.68
ATRXP46100 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.28■□□□□ 0.68
ATRXP46100 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.28■□□□□ 0.68
ATRXP46100 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.28■□□□□ 0.68
ATRXP46100 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.28■□□□□ 0.68
ATRXP46100 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATRXP46100 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATRXP46100 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.28■□□□□ 0.68
ATRXP46100 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.28■□□□□ 0.68
ATRXP46100 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATRXP46100 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATRXP46100 AP006587.3-201ENST00000525742 1516 ntBASIC19.27■□□□□ 0.68
ATRXP46100 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.27■□□□□ 0.68
ATRXP46100 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.27■□□□□ 0.68
ATRXP46100 POM121L13P-201ENST00000422362 380 ntBASIC19.27■□□□□ 0.68
ATRXP46100 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.27■□□□□ 0.68
ATRXP46100 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATRXP46100 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATRXP46100 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATRXP46100 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATRXP46100 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATRXP46100 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.27■□□□□ 0.67
ATRXP46100 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.27■□□□□ 0.67
ATRXP46100 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.27■□□□□ 0.67
ATRXP46100 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.27■□□□□ 0.67
ATRXP46100 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATRXP46100 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.26■□□□□ 0.67
ATRXP46100 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.26■□□□□ 0.67
ATRXP46100 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.26■□□□□ 0.67
ATRXP46100 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.26■□□□□ 0.67
ATRXP46100 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.26■□□□□ 0.67
ATRXP46100 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATRXP46100 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATRXP46100 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.26■□□□□ 0.67
ATRXP46100 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.26■□□□□ 0.67
ATRXP46100 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.26■□□□□ 0.67
ATRXP46100 HLA-B-256ENST00000639848 1089 ntBASIC19.26■□□□□ 0.67
ATRXP46100 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATRXP46100 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATRXP46100 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms