Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.8■□□□□ 0.92
CTSKP43235 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CTSKP43235 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.8■□□□□ 0.92
CTSKP43235 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CTSKP43235 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 RBM17P2-201ENST00000616397 1405 ntBASIC20.79■□□□□ 0.92
CTSKP43235 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.79■□□□□ 0.92
CTSKP43235 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.79■□□□□ 0.92
CTSKP43235 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CTSKP43235 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.79■□□□□ 0.92
CTSKP43235 AC093827.2-201ENST00000512654 315 ntBASIC20.79■□□□□ 0.92
CTSKP43235 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.79■□□□□ 0.92
CTSKP43235 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.79■□□□□ 0.92
CTSKP43235 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.79■□□□□ 0.92
CTSKP43235 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 AC083880.1-201ENST00000608266 535 ntBASIC20.79■□□□□ 0.92
CTSKP43235 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.79■□□□□ 0.92
CTSKP43235 MYC-209ENST00000641252 345 ntBASIC20.79■□□□□ 0.92
CTSKP43235 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.79■□□□□ 0.92
CTSKP43235 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
CTSKP43235 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSKP43235 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CTSKP43235 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 PRORSD1P-201ENST00000295112 541 ntBASIC20.78■□□□□ 0.92
CTSKP43235 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CTSKP43235 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.78■□□□□ 0.92
CTSKP43235 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.78■□□□□ 0.92
CTSKP43235 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CTSKP43235 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
CTSKP43235 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
CTSKP43235 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.78■□□□□ 0.92
CTSKP43235 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.78■□□□□ 0.92
CTSKP43235 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSKP43235 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSKP43235 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSKP43235 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.77■□□□□ 0.92
CTSKP43235 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSKP43235 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.77■□□□□ 0.92
CTSKP43235 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSKP43235 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CTSKP43235 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSKP43235 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.77■□□□□ 0.92
CTSKP43235 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.77■□□□□ 0.92
CTSKP43235 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTSKP43235 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.77■□□□□ 0.92
CTSKP43235 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTSKP43235 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CTSKP43235 AL591742.1-201ENST00000604433 565 ntBASIC20.77■□□□□ 0.92
CTSKP43235 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.77■□□□□ 0.92
CTSKP43235 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTSKP43235 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
CTSKP43235 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSKP43235 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.76■□□□□ 0.91
CTSKP43235 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSKP43235 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.76■□□□□ 0.91
CTSKP43235 AC097658.1-201ENST00000475555 843 ntBASIC20.76■□□□□ 0.91
CTSKP43235 RARRES2P4-201ENST00000514074 484 ntBASIC20.76■□□□□ 0.91
CTSKP43235 AC243732.1-201ENST00000612648 864 ntBASIC20.76■□□□□ 0.91
CTSKP43235 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSKP43235 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSKP43235 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSKP43235 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSKP43235 GUSBP5-202ENST00000510805 1989 ntBASIC20.76■□□□□ 0.91
CTSKP43235 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSKP43235 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSKP43235 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.75■□□□□ 0.91
CTSKP43235 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSKP43235 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.75■□□□□ 0.91
CTSKP43235 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.75■□□□□ 0.91
CTSKP43235 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSKP43235 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CTSKP43235 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSKP43235 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTSKP43235 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSKP43235 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSKP43235 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms