Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.64■■■□□ 2.66
KDM5CP41229 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC31.64■■■□□ 2.66
KDM5CP41229 AC233702.5-201ENST00000584107 538 ntBASIC31.64■■■□□ 2.66
KDM5CP41229 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.64■■■□□ 2.66
KDM5CP41229 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.64■■■□□ 2.66
KDM5CP41229 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
KDM5CP41229 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
KDM5CP41229 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
KDM5CP41229 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC31.64■■■□□ 2.66
KDM5CP41229 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC31.64■■■□□ 2.66
KDM5CP41229 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
KDM5CP41229 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.64■■■□□ 2.65
KDM5CP41229 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.64■■■□□ 2.65
KDM5CP41229 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC31.64■■■□□ 2.65
KDM5CP41229 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.63■■■□□ 2.65
KDM5CP41229 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.63■■■□□ 2.65
KDM5CP41229 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.63■■■□□ 2.65
KDM5CP41229 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC31.63■■■□□ 2.65
KDM5CP41229 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
KDM5CP41229 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC31.63■■■□□ 2.65
KDM5CP41229 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KDM5CP41229 POM121L13P-201ENST00000422362 380 ntBASIC31.63■■■□□ 2.65
KDM5CP41229 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.63■■■□□ 2.65
KDM5CP41229 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
KDM5CP41229 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
KDM5CP41229 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
KDM5CP41229 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
KDM5CP41229 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
KDM5CP41229 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.61■■■□□ 2.65
KDM5CP41229 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
KDM5CP41229 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC31.61■■■□□ 2.65
KDM5CP41229 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.61■■■□□ 2.65
KDM5CP41229 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
KDM5CP41229 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
KDM5CP41229 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KDM5CP41229 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KDM5CP41229 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.6■■■□□ 2.65
KDM5CP41229 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.6■■■□□ 2.65
KDM5CP41229 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.6■■■□□ 2.65
KDM5CP41229 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
KDM5CP41229 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.6■■■□□ 2.65
KDM5CP41229 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.6■■■□□ 2.65
KDM5CP41229 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KDM5CP41229 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KDM5CP41229 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.6■■■□□ 2.65
KDM5CP41229 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KDM5CP41229 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC31.6■■■□□ 2.65
KDM5CP41229 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC31.6■■■□□ 2.65
KDM5CP41229 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.6■■■□□ 2.65
KDM5CP41229 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
KDM5CP41229 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
KDM5CP41229 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
KDM5CP41229 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
KDM5CP41229 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.59■■■□□ 2.65
KDM5CP41229 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
KDM5CP41229 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
KDM5CP41229 SAPCD2P1-201ENST00000395413 1184 ntBASIC31.59■■■□□ 2.65
KDM5CP41229 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
KDM5CP41229 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
KDM5CP41229 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC31.59■■■□□ 2.65
KDM5CP41229 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.58■■■□□ 2.65
KDM5CP41229 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.58■■■□□ 2.65
KDM5CP41229 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC31.58■■■□□ 2.65
KDM5CP41229 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 SERF2-207ENST00000409614 582 ntTSL 2 BASIC31.58■■■□□ 2.65
KDM5CP41229 AC245052.3-201ENST00000450182 901 ntBASIC31.58■■■□□ 2.65
KDM5CP41229 CDV3P1-201ENST00000471403 739 ntBASIC31.58■■■□□ 2.65
KDM5CP41229 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
KDM5CP41229 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.58■■■□□ 2.65
KDM5CP41229 AC105020.6-201ENST00000621523 1217 ntBASIC31.58■■■□□ 2.65
KDM5CP41229 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KDM5CP41229 AC003102.1-202ENST00000563394 1796 ntBASIC31.57■■■□□ 2.65
KDM5CP41229 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.57■■■□□ 2.64
KDM5CP41229 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KDM5CP41229 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.57■■■□□ 2.64
KDM5CP41229 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
KDM5CP41229 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KDM5CP41229 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
KDM5CP41229 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC31.56■■■□□ 2.64
KDM5CP41229 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.56■■■□□ 2.64
KDM5CP41229 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
KDM5CP41229 GCK-205ENST00000437084 1385 ntTSL 5 BASIC31.56■■■□□ 2.64
KDM5CP41229 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
KDM5CP41229 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
KDM5CP41229 ISG20-202ENST00000379224 540 ntTSL 3 BASIC31.56■■■□□ 2.64
KDM5CP41229 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
KDM5CP41229 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.56■■■□□ 2.64
KDM5CP41229 AC139530.1-201ENST00000575312 1977 ntBASIC31.55■■■□□ 2.64
KDM5CP41229 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
KDM5CP41229 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
KDM5CP41229 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
KDM5CP41229 VMO1-204ENST00000441199 741 ntTSL 2 BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms